RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 CLEC2AQ6UVW9 174 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 Q6ZRG5 221 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 CEACAM19Q7Z692 300 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 KDF1Q8NAX2 398 aaPredicted RBP8.36□□□□□ -1.07
VCAN-208ENST00000512590 HSD17B8Q92506 261 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 APMAPQ9HDC9 416 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 B3GNT3Q9Y2A9 372 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 OR6C65A6NJZ3 312 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 OR7C1O76099 320 aaPredicted RBP8.36□□□□□ -1.07
VCAN-208ENST00000512590 CDRT1O95170 752 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 EBLN1P0CF75 366 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 GDF5P43026 501 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 OR1D5P58170 312 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 POU3F1Q03052 451 aaPredicted RBP8.36□□□□□ -1.07
VCAN-208ENST00000512590 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.36□□□□□ -1.07
VCAN-208ENST00000512590 ARHGAP11BQ3KRB8 267 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 SHEQ5VZ18 495 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 RPL7L1Q6DKI1 246 aaKnown RBP8.36□□□□□ -1.07
VCAN-208ENST00000512590 TRILQ7L0X0 811 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 C7orf26Q96N11 449 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 SLC6A18Q96N87 628 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 WACQ9BTA9 647 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 NMNAT2Q9BZQ4 307 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 OR51I2Q9H344 312 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 NAGKQ9UJ70 344 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 MKLN1Q9UL63 735 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 SQORQ9Y6N5 450 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 ZNF320A2RRD8 509 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 PRAMEF27A3QJZ7 478 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 FAM149AA5PLN7 773 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 WASH4PA8MWX3 477 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 DEGS1O15121 323 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 HOXD8P13378 290 aaPredicted RBP8.36□□□□□ -1.07
VCAN-208ENST00000512590 CD27P26842 260 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 LCN1P31025 176 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 ERVPABLB-1P60509 514 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 GPR50Q13585 617 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 PRAMEF9Q5VWM5 478 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 ZNF626Q68DY1 528 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 RGS7BPQ6MZT1 257 aaPredicted RBP8.36□□□□□ -1.07
VCAN-208ENST00000512590 RBPMS2Q6ZRY4 209 aaKnown RBP8.36□□□□□ -1.07
VCAN-208ENST00000512590 OR6T1Q8NGN1 323 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 OR5M9Q8NGP3 310 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 ZFAND1Q8TCF1 268 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 RAB1CQ92928 201 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 WBP2Q969T9 261 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 NT5DC2Q9H857 520 aa8.36□□□□□ -1.07
VCAN-208ENST00000512590 A0A0D9SG52 128 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 RNF225M0QZC1 329 aaPredicted RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 SLCO2B1O94956 709 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 CLDN1O95832 211 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 GAAP10253 952 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 TAS2R40P59535 323 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 ZNF280AP59817 542 aaPredicted RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 SQSTM1Q13501 440 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 TRIP6Q15654 476 aaKnown RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 MORN1Q5T089 497 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 HENMT1Q5T8I9 393 aaKnown RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 ALYREFQ86V81 257 aaKnown RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 CD163Q86VB7 1156 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 VWA5B2Q8N398 1253 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 OR4F6Q8NGB9 312 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 OR5R1Q8NH85 324 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 DMRTB1Q96MA1 342 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 ISYNA1Q9NPH2 558 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 MEGF11A6BM72 1044 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 SNX3O60493 162 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 EIF1BO60739 113 aaKnown RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 MT-ND4P03905 459 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 AMY2AP04746 511 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 CD3EP07766 207 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 HTR2BP41595 481 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 AMTP48728 403 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 PCBP3P57721 371 aaKnown RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 HSD17B13Q7Z5P4 300 aaPredicted RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 CPNE8Q86YQ8 564 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 TAAR9Q96RI9 348 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 SIAEQ9HAT2 523 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 WSB2Q9NYS7 404 aaPredicted RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 TM4SF1P30408 202 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 CRHR1P34998 444 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 HK3P52790 923 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 FCRLBQ6BAA4 426 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 HSD17B11Q8NBQ5 300 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 OR52R1Q8NGF1 315 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 SPOCK2Q92563 424 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 ELMOD3Q96FG2 381 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 HINT3Q9NQE9 182 aaKnown RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 PRDM15P57071 1507 aaPredicted RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 SLC22A31A6NKX4 558 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 FAM171A2A8MVW0 826 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 SBK2P0C263 348 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 GLRA1P23415 457 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 CNR2P34972 360 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 ERHP84090 104 aaKnown RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 SLC22A6Q4U2R8 563 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 TMEM25Q86YD3 366 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 FBXL6Q8N531 539 aa8.35□□□□□ -1.07
VCAN-208ENST00000512590 C19orf47Q8N9M1 422 aaKnown RBP8.35□□□□□ -1.07
VCAN-208ENST00000512590 RBMXL1Q96E39 390 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms