RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 NOSIPQ9Y314 301 aaKnown RBP12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 HDGFL3Q9Y3E1 203 aa12.99□□□□□ -0.33
CCHCR1-229ENST00000512418 GOLGA8QA0A0J9YX86 632 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 GOLGA8OA6NCC3 632 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 ZNF716A6NP11 495 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 KIAA1324LA8MWY0 1029 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 RNF223E7ERA6 249 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 GOLGA8NF8WBI6 632 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 GPR171O14626 319 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 ABCD4O14678 606 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 DHRS4L1P0CG22 281 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 CLK1P49759 484 aaKnown RBP12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 PLAURQ03405 335 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 KRTAP1-1Q07627 177 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 FAPQ12884 760 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 FAM174BQ3ZCQ3 159 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 GPAT3Q53EU6 434 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 OGFOD2Q6N063 350 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 DTX2Q86UW9 622 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 UBE2J2Q8N2K1 259 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 TRIML2Q8N7C3 387 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 ZNF433Q8N7K0 673 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 PIGXQ8TBF5 258 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 APH1AQ96BI3 265 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 ZG16BQ96DA0 208 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 RADILQ96JH8 1075 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 ARL5BQ96KC2 179 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 CCDC115Q96NT0 180 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 TRAF4Q9BUZ4 470 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 GRIP2Q9C0E4 1043 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 SLCO5A1Q9H2Y9 848 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 CISD1Q9NZ45 108 aaKnown RBP12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 NPAP1Q9NZP6 1156 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 BTNL2Q9UIR0 455 aa12.98□□□□□ -0.33
CCHCR1-229ENST00000512418 CLDN24A6NM45 220 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 SHISA9B4DS77 424 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 HMGN4O00479 90 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 RAMP1O60894 148 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 RAD51DO75771 328 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 IGHV3-9P01782 118 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 IGHV4-39P01824 125 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 THBS1P07996 1170 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 S100A3P33764 101 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 HTR3AP46098 478 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 IDH2P48735 452 aaKnown RBP12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 SLC16A1P53985 500 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 CDH11P55287 796 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 TXNL4AP83876 142 aaKnown RBP12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 CHRNEQ04844 493 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 DMTNQ08495 405 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 TMEM108Q6UXF1 575 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 HMGN2P46Q86SG4 172 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 ADGRG3Q86Y34 549 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 CMIPQ8IY22 773 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 HS6ST2Q96MM7 605 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 TRNT1Q96Q11 434 aaKnown RBP12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 REG4Q9BYZ8 158 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 OR11A1Q9GZK7 315 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 MEAF6Q9HAF1 191 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 BARX1Q9HBU1 254 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 ASB6Q9NWX5 421 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 TAS2R16Q9NYV7 291 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 MALT1Q9UDY8 824 aa12.97□□□□□ -0.33
CCHCR1-229ENST00000512418 ANK3Q12955 4377 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 CIB4A0PJX0 185 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 PRAMEF27A3QJZ7 478 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 ADAM11O75078 769 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 MRPL33O75394 65 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 CD8AP01732 235 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 BGNP21810 368 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 ACVR1BP36896 505 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 MAGEA8P43361 318 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 ANXA11P50995 505 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 STX3Q13277 289 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 NRF1Q16656 503 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 DNM1P46Q6ZS02 220 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 RNF130Q86XS8 419 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 MAPK1IP1LQ8NDC0 245 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 CNOT9Q92600 299 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 DNAJA3Q96EY1 480 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 TEX37Q96LM6 180 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 PANX1Q96RD7 426 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 SLC38A1Q9H2H9 487 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 TMEM181Q9P2C4 612 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 MGAT4BQ9UQ53 548 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 TRAPPC4Q9Y296 219 aa12.96□□□□□ -0.33
CCHCR1-229ENST00000512418 CCDC154A6NI56 674 aa12.95□□□□□ -0.34
CCHCR1-229ENST00000512418 AGAP5A6NIR3 686 aa12.95□□□□□ -0.34
CCHCR1-229ENST00000512418 CCT8L1PA6NM43 557 aa12.95□□□□□ -0.34
CCHCR1-229ENST00000512418 ZNF208O43345 1280 aa12.95□□□□□ -0.34
CCHCR1-229ENST00000512418 EIF1BO60739 113 aaKnown RBP12.95□□□□□ -0.34
CCHCR1-229ENST00000512418 CRLF1O75462 422 aa12.95□□□□□ -0.34
CCHCR1-229ENST00000512418 TP53P04637 393 aaPredicted RBP12.95□□□□□ -0.34
CCHCR1-229ENST00000512418 PGRP06401 933 aa12.95□□□□□ -0.34
CCHCR1-229ENST00000512418 CHRM4P08173 479 aa12.95□□□□□ -0.34
CCHCR1-229ENST00000512418 ALDOCP09972 364 aaKnown RBP12.95□□□□□ -0.34
CCHCR1-229ENST00000512418 UQCRBP14927 111 aa12.95□□□□□ -0.34
CCHCR1-229ENST00000512418 PTAFRP25105 342 aa12.95□□□□□ -0.34
CCHCR1-229ENST00000512418 POLR2HP52434 150 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms