RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 C6orf52Q5T4I8 152 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 MFSD4BQ5TF39 518 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 PAMR1Q6UXH9 720 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 ZNF836Q6ZNA1 936 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 ANKRD37Q7Z713 158 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 COMTD1Q86VU5 262 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 LSMEM1Q8N8F7 131 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 OR10G2Q8NGC3 310 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 OR6T1Q8NGN1 323 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 FAM57AQ8TBR7 257 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 RNF138Q8WVD3 245 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 ZG16BQ96DA0 208 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 CNPPD1Q9BV87 410 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 HHATLQ9HCP6 504 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 MAN2C1Q9NTJ4 1040 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 FAM118AQ9NWS6 357 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 UBAP1Q9NZ09 502 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 PDP1Q9P0J1 537 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 KCNE5Q9UJ90 142 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 MKLN1Q9UL63 735 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 NDRG4Q9ULP0 352 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 SLC35A3Q9Y2D2 325 aa9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 FLNAP21333 2647 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-217ENST00000512274 IGHV3-20A0A0C4DH32 117 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 C2orf92A0A1B0GVN3 265 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 GXYLT2A0PJZ3 443 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 SH3PXD2BA1X283 911 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 TRIM64CA6NLI5 447 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 AP3D1O14617 1153 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 WIPF1O43516 503 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 CDC40O60508 579 aaKnown RBP eCLIP9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 DIRAS1O95057 198 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 CCNB2O95067 398 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 ATE1O95260 518 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 HEXBP07686 556 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 TNNI3P19429 210 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 TNFRSF1BP20333 461 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 CD96P40200 585 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 PNLIPRP2P54317 469 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 CDH12P55289 794 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 NUP107P57740 925 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 CXCR4P61073 352 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 ESRRGP62508 458 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 TUBA3CQ13748 450 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 OR1C1Q15619 314 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 MAPK14Q16539 360 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 FLYWCH1Q4VC44 716 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 DCST1Q5T197 706 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 FNDC7Q5VTL7 733 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 TUBA3EQ6PEY2 450 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 ZNF613Q6PF04 617 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 ARSKQ6UWY0 536 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 C16orf47Q6ZP98 133 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 LANCL3Q6ZV70 420 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 RANBP3LQ86VV4 465 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 TSPYL5Q86VY4 417 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 VRK2Q86Y07 508 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 LACC1Q8IV20 430 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 RNF113BQ8IZP6 322 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 ARMC10Q8N2F6 343 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 ZNF527Q8NB42 609 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 FAM98AQ8NCA5 519 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 APCDD1LQ8NCL9 501 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 MDS2Q8NDY4 140 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 SETD9Q8NE22 299 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 B3GNT7Q8NFL0 401 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 SLC7A13Q8TCU3 470 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 METTL21AQ8WXB1 218 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 PIK3R3Q92569 461 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 ZNF566Q969W8 418 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 VMP1Q96GC9 406 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 HRASLS5Q96KN8 279 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 MBOAT4Q96T53 435 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 ZNF426Q9BUY5 554 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 ITPAQ9BY32 194 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 WWTR1Q9GZV5 400 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 TOR3AQ9H497 397 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 UBQLN4Q9NRR5 601 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 PNO1Q9NRX1 252 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 TEKT2Q9UIF3 430 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 TMCC3Q9ULS5 477 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 DTX4Q9Y2E6 619 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 TESMINQ9Y4I5 508 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 MAGED1Q9Y5V3 778 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 U3KQV3 271 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 JMJD1CQ15652 2540 aa9.52□□□□□ -0.89
PDLIM5-217ENST00000512274 LOC100130705A0A1B0GUX0 176 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 M0R3H8 397 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 HS6ST1O60243 411 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 TSPAN2O60636 221 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 TPST2O60704 377 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 IGKV1D-16P01601 117 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 CD46P15529 392 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 TBXA2RP21731 343 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 IFNGR2P38484 337 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 KIR2DL3P43628 341 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 RGS8P57771 180 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 TUBA4AP68366 448 aa9.51□□□□□ -0.89
PDLIM5-217ENST00000512274 OC90Q02509 493 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms