RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 LIMK2P53671 638 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 RAG2P55895 527 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 RBX1P62877 108 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZXDBP98169 803 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 SPEM2Q0P670 501 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 HNF4GQ14541 408 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 RBBP7Q16576 425 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 LIPKQ5VXJ0 399 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 HIST2H2BCQ6DN03 193 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 HIST2H2BDQ6DRA6 164 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 DPY19L3Q6ZPD9 716 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 TSPAN33Q86UF1 283 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 CACUL1Q86Y37 369 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 SLC35F3Q8IY50 421 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 RCOR2Q8IZ40 523 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 OR11L1Q8NGX0 322 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 MRGPRDQ8TDS7 321 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 RNF133Q8WVZ7 376 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 SORCS1Q8WY21 1168 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 SMARCD2Q92925 531 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 YIPF5Q969M3 257 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 RSPRY1Q96DX4 576 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 LRRC3BQ96PB8 259 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 LGMNQ99538 433 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 SLC30A3Q99726 388 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 MYOCQ99972 504 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 CCDC3Q9BQI4 270 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZNF2Q9BSG1 426 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 DPH7Q9BTV6 452 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ASPNQ9BXN1 380 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 COL25A1Q9BXS0 654 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 HDHD5Q9BXW7 423 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 NARFLQ9H6Q4 476 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 TBC1D17Q9HA65 648 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 UGT1A10Q9HAW8 530 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 THSD1Q9NS62 852 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 B3GNT3Q9Y2A9 372 aa4.62□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZDBF2Q9HCK1 2354 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 MTCL1Q9Y4B5 1905 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 TRAV19A0A0A6YYK7 116 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 TRBV7-9A0A0J9YWB2 115 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SHISA3A0PJX4 238 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 MBD3L5A6NJ08 208 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 DUXAA6NLW8 204 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 NPIPB5A8MRT5 1133 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 UGT1A9O60656 530 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SC5DO75845 299 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 LRIG2O94898 1065 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 CPNE6O95741 557 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 ACTL6AO96019 429 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SERPINA1P01009 418 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SHBGP04278 402 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 TCRBP04435 133 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SMIM10L1P0DMW3 83 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 NDUFB7P17568 137 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 CHRNB2P17787 502 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 FBLP22087 321 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 FDXRP22570 491 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 F8A1P23610 371 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 APEX1P27695 318 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 PCSK6P29122 969 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 GPX4P36969 197 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 PLA2G16P53816 162 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 EPHA5P54756 1037 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 CTXN1P60606 82 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 MAGOHP61326 146 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 LSM6P62312 80 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 MYBPC1Q00872 1141 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 CDR2Q01850 454 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZIK1Q3SY52 487 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 POM121L1PQ3SYA9 428 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAM102AQ5T9C2 384 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SYPL2Q5VXT5 272 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 NIPAL3Q6P499 406 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAM159AQ6UWV7 190 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 IZUMO2Q6UXV1 221 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SEM1Q6ZVN7 128 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAM183BPQ6ZVS7 135 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 TTLL10Q6ZVT0 673 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZNF571Q7Z3V5 609 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 IRF2BP2Q7Z5L9 587 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SCD5Q86SK9 330 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SLC22A16Q86VW1 577 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 APCDD1Q8J025 514 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SLC44A3Q8N4M1 653 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 EMC1Q8N766 993 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 NUDCD2Q8WVJ2 157 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 ASB11Q8WXH4 323 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 NPIPB3Q92617 1050 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 MAGOHBQ96A72 148 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 FAM131CQ96AQ9 280 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 BIRC7Q96CA5 298 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 TLCD1Q96CP7 247 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 ECHDC3Q96DC8 303 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 MRPL48Q96GC5 212 aaKnown RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SMIM10Q96HG1 83 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 MRGPRX2Q96LB1 330 aa4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 ZNF641Q96N77 438 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC11-208ENST00000511955 SERPINB11Q96P15 392 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms