RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 RIN1Q13671 783 aa16.51■□□□□ 0.23
HMGCS1-206ENST00000511774 CCNYL1Q8N7R7 359 aa16.51■□□□□ 0.23
HMGCS1-206ENST00000511774 ST8SIA1Q92185 356 aa16.51■□□□□ 0.23
HMGCS1-206ENST00000511774 GCDHQ92947 438 aaPredicted RBP16.51■□□□□ 0.23
HMGCS1-206ENST00000511774 LAT2Q9GZY6 243 aa16.51■□□□□ 0.23
HMGCS1-206ENST00000511774 CTPS2Q9NRF8 586 aa16.51■□□□□ 0.23
HMGCS1-206ENST00000511774 ACER3Q9NUN7 267 aa16.51■□□□□ 0.23
HMGCS1-206ENST00000511774 FLVCR1Q9Y5Y0 555 aa16.51■□□□□ 0.23
HMGCS1-206ENST00000511774 SERINC4A6NH21 518 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 B9A039 149 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 GPR171O14626 319 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 CYP7B1O75881 506 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 TFPIP10646 304 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 PRPH2P23942 346 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 GCAP28676 217 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 CALCRP30988 508 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 PPOXP50336 477 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 EFNB3Q15768 340 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 CLEC6AQ6EIG7 209 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 VHLLQ6RSH7 139 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 RELL1Q8IUW5 271 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 SLC22A9Q8IVM8 553 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 PIGXQ8TBF5 258 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 CCT7Q99832 543 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 CCDC106Q9BWC9 280 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 RRAGDQ9NQL2 400 aaPredicted RBP16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 EMCNQ9ULC0 261 aa16.5■□□□□ 0.23
HMGCS1-206ENST00000511774 WNK2Q9Y3S1 2297 aa16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 TMEM129A0AVI4 362 aa16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 PMS2P2O95744 297 aa16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 SNRPAP09012 282 aaKnown RBP16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 CDH2P19022 906 aaPredicted RBP16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 PRPS1P60891 318 aa16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 H3F3AP84243 136 aa16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 PRR31Q5SQ13 230 aa16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 PEG10Q86TG7 708 aaKnown RBP16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 OR5D16Q8NGK9 328 aa16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 FAM216AQ8WUB2 273 aa16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 SLC38A2Q96QD8 506 aa16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 SDF2Q99470 211 aa16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 ACTRT3Q9BYD9 372 aa16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 SERHL2Q9H4I8 314 aa16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 SERINC1Q9NRX5 453 aa16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 C1orf109Q9NX04 203 aa16.49■□□□□ 0.23
HMGCS1-206ENST00000511774 G3V2L1 256 aa16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 FCMRO60667 390 aa16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 UBTFL6P0CB48 400 aaPredicted RBP16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 MPGP29372 298 aa16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 PLAURQ03405 335 aa16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 HGFACQ04756 655 aa16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 TP53BP2Q13625 1128 aa16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 RFTN2Q52LD8 501 aaPredicted RBP16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 THSD4Q6ZMP0 1018 aa16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 C1orf229Q6ZS94 237 aaPredicted RBP16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 FRMD7Q6ZUT3 714 aa16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 MYPOPQ86VE0 399 aaPredicted RBP16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 CARM1Q86X55 608 aa16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 ZNF786Q8N393 782 aa16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 ZIC4Q8N9L1 334 aa16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 OR7A2PQ8NGA2 310 aa16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 ADAMTS15Q8TE58 950 aa16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 SLC25A43Q8WUT9 341 aaPredicted RBP16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 DOK1Q99704 481 aa16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 IQCGQ9H095 443 aaKnown RBP16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 TUBB1Q9H4B7 451 aa16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 UPB1Q9UBR1 384 aa16.48■□□□□ 0.23
HMGCS1-206ENST00000511774 TMPRSS2O15393 492 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 PDE5AO76074 875 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 LAMP1P11279 417 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 CCT3P49368 545 aaKnown RBP16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 OR2B6P58173 313 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 HILS1P60008 231 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 RPS26P62854 115 aaKnown RBP16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 TUBA1BP68363 451 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 TUBA4AP68366 448 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 DEFA6Q01524 100 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 NAAAQ02083 359 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 ZNF141Q15928 474 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 MAPK14Q16539 360 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 AWAT1Q58HT5 328 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 TIFABQ6ZNK6 161 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 TUBA1AQ71U36 451 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 ADGRG3Q86Y34 549 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 ARL8AQ96BM9 186 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 METTL2AQ96IZ6 378 aaKnown RBP16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 OR7D2Q96RA2 312 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 NMUR2Q9GZQ4 415 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 RAB1BQ9H0U4 201 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 LPAR2Q9HBW0 351 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 CHRNA9Q9UGM1 479 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 SPEF1Q9Y4P9 236 aa16.47■□□□□ 0.23
HMGCS1-206ENST00000511774 hCG_2039718K7EN88 272 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 NR5A2O00482 541 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 WNT9BO14905 357 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 UGT2B17O75795 530 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 SNUPNO95149 360 aaKnown RBP16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 WNT11O96014 354 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 CECR9P0C854 216 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 IMPDH2P12268 514 aa16.46■□□□□ 0.23
HMGCS1-206ENST00000511774 MAGEA8P43361 318 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms