RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 GPR89AB7ZAQ6 455 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 ABCD4O14678 606 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 ARPC3O15145 178 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 RGS16O15492 202 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 POLR2DO15514 142 aaKnown RBP2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 TAPBPO15533 448 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 CXCL13O43927 109 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 TIMP1P01033 207 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 LGALS2P05162 132 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 GPR89BP0CG08 455 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 MMP11P24347 488 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 HTR1FP30939 366 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 TDO2P48775 406 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 CSNK1G2P78368 415 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 SPIBQ01892 262 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 MAP2K1Q02750 393 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 EGFEM1PQ0D2K5 195 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 ARFRP1Q13795 201 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 GANABQ14697 944 aaKnown RBP2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 BEND3Q5T5X7 828 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 PMF1Q6P1K2 205 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 UNQ9370/PRO34162Q6UXP9 181 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 FAM220AQ7Z4H9 259 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 ZNF740Q8NDX6 193 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 OR1E3Q8WZA6 343 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 ST8SIA1Q92185 356 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 IMMP1LQ96LU5 166 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 KLHDC3Q9BQ90 382 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 NIPSNAP3BQ9BS92 247 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 OR51J1Q9H342 316 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 ASB8Q9H765 288 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 VCPKMTQ9H867 229 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 POPDC2Q9HBU9 364 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 ABCB10Q9NRK6 738 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 PIPOXQ9P0Z9 390 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 PTBP2Q9UKA9 531 aaKnown RBP2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 TMCC3Q9ULS5 477 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 RASD1Q9Y272 281 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 MEMO1Q9Y316 297 aa2.4□□□□□ -2.03
TRAPPC11-207ENST00000511409 BBOX1O75936 387 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 SCGNO76038 276 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 SNAPINO95295 136 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 IGHV3-48P01763 117 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 DUX4L4P0CJ87 422 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 ZNF44P15621 663 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 FUT3P21217 361 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 GLRA2P23416 452 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 CD1BP29016 333 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 HNRNPA3P51991 378 aaKnown RBP2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 APOC4P55056 127 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 PKNOX1P55347 436 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 SELENOTP62341 195 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 TLE4Q04727 773 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 FGL1Q08830 312 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 LRRC23Q53EV4 343 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 PPP1R42Q7Z4L9 355 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 VSTM4Q8IW00 320 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 FTMTQ8N4E7 242 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 ARL6IP6Q8N6S5 226 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 HTR3CQ8WXA8 447 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 FRAT1Q92837 279 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 FGF11Q92914 225 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 EFHD2Q96C19 240 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 RBM14Q96PK6 669 aaKnown RBP2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 PLEKHF1Q96S99 279 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 TBX15Q96SF7 602 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 ARHGDIGQ99819 225 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 NAT9Q9BTE0 207 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 GORASP2Q9H8Y8 452 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 SH2D2AQ9NP31 389 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 UFSP2Q9NUQ7 469 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 C6orf203Q9P0P8 240 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 NAP1L2Q9ULW6 460 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 TRAF3IP3Q9Y228 551 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 UGT2A1Q9Y4X1 527 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 TIMM10BQ9Y5J6 103 aa2.39□□□□□ -2.03
TRAPPC11-207ENST00000511409 TDRD6O60522 2096 aaKnown RBP2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 A0A0G2JRQ6 117 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 F5H6K3 240 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 H0Y9J4 135 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 ZNF208O43345 1280 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 UGT1A9O60656 530 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 PFKFB2O60825 505 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 ATP5LO75964 103 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 SUPT7LO94864 414 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 DIRAS1O95057 198 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 AP2A1O95782 977 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 IGLV1-47P01700 117 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 P04436 131 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 HPNP05981 417 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 PCMT1P22061 227 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 CALCRP30988 508 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 SHMT2P34897 504 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 DRD3P35462 400 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 RPL13AP40429 203 aaKnown RBP2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 HNMTP50135 292 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 GBX2P52951 348 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 KLRC3Q07444 240 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 C1orf61Q13536 156 aa2.38□□□□□ -2.03
TRAPPC11-207ENST00000511409 RIPK1Q13546 671 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms