RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 LEF1Q9UJU2 399 aaPredicted RBP6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 MRTO4Q9UKD2 239 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 CLEC4AQ9UMR7 237 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 PCDHB10Q9UN67 800 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 PCDHGB4Q9UN71 923 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 NAV2Q8IVL1 2488 aa6.45□□□□□ -1.38
TOPBP1-207ENST00000509162 NOTCH2Q04721 2471 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 IGKV1D-42A0A075B6H8 117 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 A0A087WZY1 265 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 IGHV3-15A0A0B4J1V0 119 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 A0A1W2PNV4 684 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 TMEM72A0PK05 275 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 DUXAA6NLW8 204 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 MRASO14807 208 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 SMAD9O15198 467 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 ADAMDEC1O15204 470 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 EIF4E2O60573 245 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 FZD7O75084 574 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 PGM3O95394 542 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 ANP32DO95626 131 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 KRT75O95678 551 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 CSTAP01040 98 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 CGAP01215 116 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 OPN1SWP03999 348 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 SNRPB2P08579 225 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 PABPC4LP0CB38 370 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 NR2F1P10589 423 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 GABRA1P14867 456 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 AGAP20933 346 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 ELK4P28324 431 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 HTR1EP28566 365 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 CHRNB4P30926 498 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 SFTPDP35247 375 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 TIMP3P35625 211 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 KIR2DL2P43627 348 aaPredicted RBP6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 PER3P56645 1201 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 KCNJ10P78508 379 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 LRRC74AQ0VAA2 488 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 FADDQ13158 208 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 NFYCQ13952 458 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 PON3Q15166 354 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 BCL2A1Q16548 175 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 ZNF239Q16600 458 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 GLYR1Q49A26 553 aaPredicted RBP6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 HSP90B2PQ58FF3 399 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 METTL21CQ5VZV1 264 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 ABLIM2Q6H8Q1 611 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 C22orf34Q6ZV56 151 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 WFDC8Q8IUA0 241 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 RBM45Q8IUH3 476 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 WDFY1Q8IWB7 410 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 MRPL41Q8IXM3 137 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 Q8N3U1 123 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 TRIML2Q8N7C3 387 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 VPS37AQ8NEZ2 397 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 TOR1AIP2Q8NFQ8 470 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 OR52P1PQ8NH57 321 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 OR10D3Q8NH80 312 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 OR2V1Q8NHB1 315 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 LILRB4Q8NHJ6 448 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 RNF128Q8TEB7 428 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 ZBTB8AQ96BR9 441 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 C3orf49Q96BT1 292 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 ARL5BQ96KC2 179 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 KLHL15Q96M94 604 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 PINK1Q9BXM7 581 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 HOXD1Q9GZZ0 328 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 FAM107BQ9H098 131 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 ENKD1Q9H0I2 346 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 TMEM38AQ9H6F2 299 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 RNF122Q9H9V4 155 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 CTPS2Q9NRF8 586 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 TPSG1Q9NRR2 321 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 ACER3Q9NUN7 267 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 EXD2Q9NVH0 621 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 CMTM6Q9NX76 183 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 ALKBH4Q9NXW9 302 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 OSGIN1Q9UJX0 560 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 HIF3AQ9Y2N7 669 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 NDUFAF1Q9Y375 327 aa6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 KLF2Q9Y5W3 355 aaPredicted RBP6.44□□□□□ -1.38
TOPBP1-207ENST00000509162 PRR14LQ5THK1 2151 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 A0A1W2PPR1 153 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 CCT8L1PA6NM43 557 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 AHRRA9YTQ3 701 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 M0R3H8 397 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 NME4O00746 187 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 RGS13O14921 159 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 SHOX2O60902 331 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 SS18L1O75177 396 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 CYP7B1O75881 506 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 AGR2O95994 175 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 TMIGD3P0DMS9 266 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 TNFRSF1BP20333 461 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 PTNP21246 168 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 ENPP1P22413 925 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 SLC6A2P23975 617 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 RYKP34925 604 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 PCGF2P35227 344 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms