RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 NEU2Q9Y3R4 380 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 PTPRJQ12913 1337 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 A0A087X0T9 212 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 A0A1W2PN81 502 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 TRABD2BA6NFA1 517 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 SIVA1O15304 175 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 GYG2O15488 501 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 SPINT2O43291 252 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ZIC3O60481 467 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ZMPSTE24O75844 475 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 MT-CO2P00403 227 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 TRIM49P0CI25 452 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 TRIM49CP0CI26 452 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ACP1P24666 158 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 CHRNA7P36544 502 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 KIR2DL3P43628 341 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 STARD6P59095 220 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 B2MP61769 119 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 BLOC1S1P78537 153 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 MGAT3Q09327 533 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 MARCH8Q5T0T0 291 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 LIPNQ5VXI9 398 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 REEP3Q6NUK4 255 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 CD164L2Q6UWJ8 174 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 FAM122BQ7Z309 247 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 LIMS2Q7Z4I7 341 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 ARHGAP24Q8N264 748 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 C17orf78Q8N4C9 275 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 AMER3Q8N944 861 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 OR4C6Q8NH72 309 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 TRUB1Q8WWH5 349 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 TCEAL3Q969E4 200 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 TXNDC15Q96J42 360 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 CELF6Q96J87 481 aaKnown RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 GUCD1Q96NT3 240 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 SERPINB11Q96P15 392 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 SGPP1Q9BX95 441 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 UGT2B28Q9BY64 529 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 SEMA6CQ9H3T2 930 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 GPN2Q9H9Y4 310 aaPredicted RBP3.62□□□□□ -1.83
NEDD4-209ENST00000508871 C1orf109Q9NX04 203 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 OR1A2Q9Y585 309 aa3.62□□□□□ -1.83
NEDD4-209ENST00000508871 A8MZ25 164 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 KCNK1O00180 336 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 IMPA2O14732 288 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 SUV39H1O43463 412 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 DHFRP00374 187 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ATP1B2P14415 290 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 FCGR2BP31994 310 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 CD80P33681 288 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 EIF2S3P41091 472 aaKnown RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 PLA2G16P53816 162 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 EPHA5P54756 1037 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 NAGLUP54802 743 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 CCL23P55773 120 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ACTA2P62736 377 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ACTG2P63267 376 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ACTC1P68032 377 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ACTA1P68133 377 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 GRIK2Q13002 908 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 TFDP2Q14188 446 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF268Q14587 947 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 FASTKD3Q14CZ7 662 aaKnown RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 SDHAF4Q5VUM1 108 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 APOOLQ6UXV4 268 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 SLCO6A1Q86UG4 719 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 CMTM1Q8IZ96 169 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 L3MBTL4Q8NA19 623 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 PIGXQ8TBF5 258 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 HTR3CQ8WXA8 447 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 MYLIPQ8WY64 445 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 HOXB13Q92826 284 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 FOXN4Q96NZ1 517 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 CSPG4P5Q96PW8 444 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 C1QTNF7Q9BXJ2 289 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ZNF350Q9GZX5 532 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 OR10A2Q9H208 303 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 IL1RAPQ9NPH3 570 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 CMTM6Q9NX76 183 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 A0A1B0GUH1 482 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 PRSS51A0A1B0GVH4 220 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 TMEM129A0AVI4 362 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 HIDE1A8MVS5 230 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 G3V2T6 193 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 CDC7O00311 574 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 BHLHE40O14503 412 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 HRO43593 1189 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 PGK1P00558 417 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 GLI1P08151 1106 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 HOXB3P14651 431 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 ST6GAL1P15907 406 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 PSMB9P28065 219 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 TRHRP34981 398 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 TCTAP57738 103 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 OR4D2P58180 307 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 PSME3P61289 254 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 MRPS6P82932 125 aaKnown RBP3.61□□□□□ -1.83
NEDD4-209ENST00000508871 CAV1Q03135 178 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 PRKCDQ05655 676 aa3.61□□□□□ -1.83
NEDD4-209ENST00000508871 GK3PQ14409 553 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms