RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 NTHL1P78549 312 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 PUDPQ08623 228 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 PSG7Q13046 419 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 EIF2B1Q14232 305 aaKnown RBP3.25□□□□□ -1.89
DHFR-204ENST00000508282 CHI3L2Q15782 390 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 PRR4Q16378 134 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 GGTA1PQ4G0N0 100 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 FAM74A3Q4VXF1 159 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 CELF3Q5SZQ8 465 aaKnown RBP3.25□□□□□ -1.89
DHFR-204ENST00000508282 UFSP1Q6NVU6 142 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 PNCKQ6P2M8 343 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 BTNL3Q6UXE8 466 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 KDM7AQ6ZMT4 941 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 LANCL3Q6ZV70 420 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 CCDC80Q76M96 950 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 PAQR7Q86WK9 346 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 ECHDC2Q86YB7 292 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 TGIF2LXQ8IUE1 241 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 PSTKQ8IV42 348 aaKnown RBP3.25□□□□□ -1.89
DHFR-204ENST00000508282 MCOLN2Q8IZK6 566 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 CADM2Q8N3J6 435 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 SPATA4Q8NEY3 305 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 CCDC148Q8NFR7 591 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 FAM3CQ92520 227 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 C18orf25Q96B23 403 aaPredicted RBP3.25□□□□□ -1.89
DHFR-204ENST00000508282 ZNF184Q99676 751 aaPredicted RBP3.25□□□□□ -1.89
DHFR-204ENST00000508282 SLC30A2Q9BRI3 323 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 CHRDL1Q9BU40 450 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 ROPN1BQ9BZX4 212 aaPredicted RBP3.25□□□□□ -1.89
DHFR-204ENST00000508282 COMMD4Q9H0A8 199 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 SLC25A51Q9H1U9 297 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 SMOXQ9NWM0 555 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 SLC2A8Q9NY64 477 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 PCSK1NQ9UHG2 260 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 KIAA1257Q9ULG3 409 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 BARX2Q9UMQ3 279 aaPredicted RBP3.25□□□□□ -1.89
DHFR-204ENST00000508282 PDE10AQ9Y233 779 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 PNPLA6Q8IY17 1366 aa3.25□□□□□ -1.89
DHFR-204ENST00000508282 TRBV7-9A0A0J9YWB2 115 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 GOLGA6L7A0A1B0GV03 622 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 A0A1W2PNV4 684 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 ESYT2A0FGR8 921 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 NPIPA7E9PJI5 369 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 EMC8O43402 210 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 TIMM8AO60220 97 aaPredicted RBP3.24□□□□□ -1.89
DHFR-204ENST00000508282 B3GAT3O94766 335 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 IGF1P05019 195 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 NPIPA8P0DM63 369 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 ZNF32P17041 273 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 TBXA2RP21731 343 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 MDKP21741 143 aaPredicted RBP3.24□□□□□ -1.89
DHFR-204ENST00000508282 PTBP1P26599 531 aaKnown RBP eCLIP3.24□□□□□ -1.89
DHFR-204ENST00000508282 EMDP50402 254 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 EWSR1Q01844 656 aaKnown RBP eCLIP3.24□□□□□ -1.89
DHFR-204ENST00000508282 TGM3Q08188 693 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 IL18Q14116 193 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 ATXN7L3Q14CW9 347 aaPredicted RBP3.24□□□□□ -1.89
DHFR-204ENST00000508282 WDR43Q15061 677 aaKnown RBP eCLIP3.24□□□□□ -1.897e-6■■■■■ 27.3
DHFR-204ENST00000508282 UBE2V2Q15819 145 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 KYAT1Q16773 422 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 HADHQ16836 314 aaKnown RBP3.24□□□□□ -1.89
DHFR-204ENST00000508282 CTSL3PQ5NE16 218 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 TFAP2EQ6VUC0 442 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 OR52K1Q8NGK4 314 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 OR4D5Q8NGN0 318 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 STARD8Q92502 1023 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 PEX13Q92968 403 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 TUBGCP2Q9BSJ2 902 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 FEM1AQ9BSK4 669 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 FANCEQ9HB96 536 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 MCCC2Q9HCC0 563 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 MRPL39Q9NYK5 338 aaKnown RBP3.24□□□□□ -1.89
DHFR-204ENST00000508282 ADAM28Q9UKQ2 775 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 NPIPA1Q9UND3 350 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 NPTNQ9Y639 398 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 PLEKHG2Q9H7P9 1386 aa3.24□□□□□ -1.89
DHFR-204ENST00000508282 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.24□□□□□ -1.892e-9■■■■■ 39.6
DHFR-204ENST00000508282 GRIN2DO15399 1336 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 TDRD6O60522 2096 aaKnown RBP3.23□□□□□ -1.89
DHFR-204ENST00000508282 A0A1B0GVL5 298 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 PINLYPA6NC86 204 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 BTBD17A6NE02 478 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 OR7A17O14581 309 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 LRATO95237 230 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 TSPAN12O95859 305 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 PGK1P00558 417 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 PABPC4LP0CB38 370 aaKnown RBP3.23□□□□□ -1.89
DHFR-204ENST00000508282 STAG3L3P0CL85 134 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 POU2F1P14859 743 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 NCK1P16333 377 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 SDC1P18827 310 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 HPCAL1P37235 193 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 EPS15P42566 896 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 STK19P49842 368 aaPredicted RBP3.23□□□□□ -1.89
DHFR-204ENST00000508282 AP3M2P53677 418 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 IFT88Q13099 833 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 IL17AQ16552 155 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 DPYSL2Q16555 572 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 CYBRD1Q53TN4 286 aa3.23□□□□□ -1.89
DHFR-204ENST00000508282 SPANXN2Q5MJ10 180 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms