RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 BPIFB6Q8NFQ5 453 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 KBTBD8Q8NFY9 601 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 OR5M9Q8NGP3 310 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 OR5M3Q8NGP4 307 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.31□□□□□ -1.24
SCN1A-207ENST00000507401 C16orf78Q8WTQ4 265 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 APIPQ96GX9 242 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 HBEGFQ99075 208 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 CHID1Q9BWS9 393 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 UGT2B28Q9BY64 529 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 TRIM8Q9BZR9 551 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 NXF5Q9H1B4 397 aaKnown RBP7.31□□□□□ -1.24
SCN1A-207ENST00000507401 UBQLN3Q9H347 655 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 DSN1Q9H410 356 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 EXO5Q9H790 373 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 KAT8Q9H7Z6 458 aaKnown RBP7.31□□□□□ -1.24
SCN1A-207ENST00000507401 SLC35C2Q9NQQ7 365 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 GIMAP4Q9NUV9 329 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 POU2F3Q9UKI9 436 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.31□□□□□ -1.24
SCN1A-207ENST00000507401 TRAPPC4Q9Y296 219 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 LIPGQ9Y5X9 500 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 ADGRG4Q8IZF6 3080 aa7.31□□□□□ -1.24
SCN1A-207ENST00000507401 HCFC1P51610 2035 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 FRG2CA6NGY1 282 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 HMX3A6NHT5 357 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 CCDC154A6NI56 674 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 OR6C70A6NIJ9 312 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 AGAP5A6NIR3 686 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 MYO1GB0I1T2 1018 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 J3QW42 95 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 PLOD2O00469 737 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 EI24O14681 340 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 SLC16A6O15403 523 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 TMCC2O75069 709 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 UGT2B17O75795 530 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 CBR3O75828 277 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 EPPINO95925 133 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 IL3P08700 152 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 GNAO1P09471 354 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 IFI6P09912 130 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 RAP2AP10114 183 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 DDCP20711 480 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 PRPH2P23942 346 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 GDF1P27539 372 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 ARRB2P32121 409 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 UGT2B15P54855 530 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 TPD52P55327 224 aaPredicted RBP7.3□□□□□ -1.24
SCN1A-207ENST00000507401 HMGCS1Q01581 520 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 TEKQ02763 1124 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 DUSP2Q05923 314 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 TFF3Q07654 80 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 DUSP8Q13202 625 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 EXOSC7Q15024 291 aaKnown RBP7.3□□□□□ -1.24
SCN1A-207ENST00000507401 TIMM50Q3ZCQ8 353 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 ZNF404Q494X3 552 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 CDONQ4KMG0 1287 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 FAM98BQ52LJ0 330 aaKnown RBP7.3□□□□□ -1.24
SCN1A-207ENST00000507401 AGKQ53H12 422 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 CEP78Q5JTW2 689 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 C1orf185Q5T7R7 199 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 RIPPLY2Q5TAB7 128 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 FNDC7Q5VTL7 733 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 VASNQ6EMK4 673 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 TMEM64Q6YI46 380 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 RNF165Q6ZSG1 346 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 IKBIPQ70UQ0 350 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 SPATA19Q7Z5L4 167 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 ZDHHC13Q8IUH4 622 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 LYSMD2Q8IV50 215 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 CCDC103Q8IW40 242 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 PM20D2Q8IYS1 436 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 MMP21Q8N119 569 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 RPRMLQ8N4K4 120 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 POC5Q8NA72 575 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 OR52R1Q8NGF1 315 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 OR10Q1Q8NGQ4 319 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 FBLIM1Q8WUP2 373 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 HGDQ93099 445 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 SLC35A4Q96G79 324 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 REXO5Q96IC2 774 aaKnown RBP7.3□□□□□ -1.24
SCN1A-207ENST00000507401 JSRP1Q96MG2 331 aaPredicted RBP7.3□□□□□ -1.24
SCN1A-207ENST00000507401 GNRHR2Q96P88 292 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 TIMP4Q99727 224 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 SSBP4Q9BWG4 385 aaPredicted RBP7.3□□□□□ -1.24
SCN1A-207ENST00000507401 ITPAQ9BY32 194 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 NXF2Q9GZY0 626 aaKnown RBP7.3□□□□□ -1.24
SCN1A-207ENST00000507401 WDR55Q9H6Y2 383 aaPredicted RBP7.3□□□□□ -1.24
SCN1A-207ENST00000507401 NIPAL2Q9H841 368 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 TAS2R9Q9NYW1 312 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 SPRR3Q9UBC9 169 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 OSGIN1Q9UJX0 560 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 EXO1Q9UQ84 846 aaKnown RBP7.3□□□□□ -1.24
SCN1A-207ENST00000507401 DTX4Q9Y2E6 619 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 MRPS18CQ9Y3D5 142 aaKnown RBP7.3□□□□□ -1.24
SCN1A-207ENST00000507401 FAM215AQ9Y5M1 114 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 FREM3P0C091 2139 aa7.3□□□□□ -1.24
SCN1A-207ENST00000507401 FBN2P35556 2912 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 NCKAP5O14513 1909 aa7.29□□□□□ -1.24
SCN1A-207ENST00000507401 A0A087WV62 115 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms