RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 IGHV1-69-2A0A0G2JMI3 117 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 A0A1W2PNR3 127 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 OR6C65A6NJZ3 312 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 CLDN25C9JDP6 229 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 SAP18O00422 153 aaKnown RBP2.76□□□□□ -1.97
TCOF1-208ENST00000506063 NR5A2O00482 541 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 PLPP1O14494 284 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 DNALI1O14645 258 aaPredicted RBP2.76□□□□□ -1.97
TCOF1-208ENST00000506063 PHGDHO43175 533 aaKnown RBP2.76□□□□□ -1.97
TCOF1-208ENST00000506063 GMFGO60234 142 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 SH3BGRLO75368 114 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 FBXO24O75426 580 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 SASH3O75995 380 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 UBOX5O94941 541 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 IGHV2-70P01814 119 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 ZSCAN5DPP0CG00 497 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 NR2F6P10588 404 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 CPMP14384 443 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 ETS1P14921 441 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 PCSK2P16519 638 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 EPORP19235 508 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 NR4A1P22736 598 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 STX2P32856 288 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 TGFBR2P37173 567 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 GP5P40197 560 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 CASP2P42575 452 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 SLC1A2P43004 574 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 RAD52P43351 418 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 MAGEA6P43360 314 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 MAGEA8P43361 318 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 KIR2DS4P43632 304 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 KCNJ1P48048 391 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 SLC12A2P55011 1212 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 AP1S2P56377 157 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 BPIFB3P59826 476 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 RAC3P60763 192 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 TUBA1BP68363 451 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 TUBA4AP68366 448 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 CRADDP78560 199 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 CCL8P80075 99 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 PRR5P85299 388 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 PSG6Q00889 435 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 ILF2Q12905 390 aaKnown RBP2.76□□□□□ -1.97
TCOF1-208ENST00000506063 FOXF1Q12946 379 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 SNTB2Q13425 540 aaKnown RBP2.76□□□□□ -1.97
TCOF1-208ENST00000506063 PDAP1Q13442 181 aaKnown RBP2.76□□□□□ -1.97
TCOF1-208ENST00000506063 E2F2Q14209 437 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 CRYMQ14894 314 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 LARS2Q15031 903 aaKnown RBP2.76□□□□□ -1.97
TCOF1-208ENST00000506063 LTB4RQ15722 352 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 FXNQ16595 210 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 C18orf21Q32NC0 220 aaPredicted RBP2.76□□□□□ -1.97
TCOF1-208ENST00000506063 TRMT12Q53H54 448 aaKnown RBP2.76□□□□□ -1.97
TCOF1-208ENST00000506063 SPANXN3Q5MJ09 141 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 OTUD3Q5T2D3 398 aaPredicted RBP2.76□□□□□ -1.97
TCOF1-208ENST00000506063 TSPO2Q5TGU0 170 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 GPR157Q5UAW9 335 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 REP15Q6BDI9 236 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 CRIP3Q6Q6R5 217 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 FRA10AC1Q70Z53 315 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 TUBA1AQ71U36 451 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 PRUNE1Q86TP1 453 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 COMTD1Q86VU5 262 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 PALM2Q8IXS6 379 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 MYO1HQ8N1T3 1032 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 UBE2J2Q8N2K1 259 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 RNF175Q8N4F7 328 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 FAM169BQ8N8A8 192 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 LINC00482Q8N8I6 264 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 MNS1Q8NEH6 495 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 OR52R1Q8NGF1 315 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 ZFP90Q8TF47 636 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 SLC9A6Q92581 669 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 CDKL2Q92772 493 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 APH1AQ96BI3 265 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 LRRC39Q96DD0 335 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 MFSD3Q96ES6 412 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 WDR34Q96EX3 536 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 PTCD3Q96EY7 689 aaKnown RBP2.76□□□□□ -1.97
TCOF1-208ENST00000506063 MS4A14Q96JA4 679 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 PRR25Q96S07 402 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 ATOH8Q96SQ7 321 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 RBBP8Q99708 897 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 RHOXF2Q9BQY4 288 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 CHID1Q9BWS9 393 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 TRIM31Q9BZY9 425 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 ROGDIQ9GZN7 287 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 VPS11Q9H270 941 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 PATZ1Q9HBE1 687 aaKnown RBP2.76□□□□□ -1.97
TCOF1-208ENST00000506063 PRM3Q9NNZ6 103 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 OBP2BQ9NPH6 170 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 SERTAD4Q9NUC0 356 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 C20orf96Q9NUD7 363 aaPredicted RBP2.76□□□□□ -1.97
TCOF1-208ENST00000506063 STOML1Q9UBI4 398 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 PHF11Q9UIL8 331 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 VPREB3Q9UKI3 123 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 CES1P1Q9UKY3 287 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 PYCARDQ9ULZ3 195 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 CHMP2BQ9UQN3 213 aa2.76□□□□□ -1.97
TCOF1-208ENST00000506063 RNF213Q63HN8 5207 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms