RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 QRSL1Q9H0R6 528 aaKnown RBP18.55■□□□□ 0.56
SQSTM1-210ENST00000506042 MALT1Q9UDY8 824 aa18.55■□□□□ 0.56
SQSTM1-210ENST00000506042 FBXO9Q9UK97 447 aaPredicted RBP18.55■□□□□ 0.56
SQSTM1-210ENST00000506042 CR1P17927 2039 aa18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 TLDC2A0PJX2 215 aa18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 ELOA3DA6NLF2 546 aaPredicted RBP18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 H6PDO95479 791 aa18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 CHRNGP07510 517 aa18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 ALDH3A1P30838 453 aa18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 GZMKP49863 264 aa18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 RNF144AP50876 292 aaPredicted RBP18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 HBA1P69905 142 aa18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 IFFO1Q0D2I5 559 aa18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 ELOA3BQ3SY89 546 aa18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 ANXA8L1Q5VT79 327 aa18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 ELOA3Q8NG57 546 aa18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 OR10H5Q8NGA6 315 aa18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 EPS8L3Q8TE67 593 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 MOV10Q9HCE1 1003 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 MKLN1Q9UL63 735 aa18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 TRAPPC4Q9Y296 219 aa18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 ATP23Q9Y6H3 246 aa18.54■□□□□ 0.56
SQSTM1-210ENST00000506042 TMEM233B4DJY2 109 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 RNASET2O00584 256 aaKnown RBP18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 DNAJA2O60884 412 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 NDUFS7O75251 213 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 SKAP2O75563 359 aaPredicted RBP18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 SNUPNO95149 360 aaKnown RBP18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 SHBGP04278 402 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 KHKP50053 298 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 EFNA4P52798 201 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 SLC16A1P53985 500 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 CLDN8P56748 225 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 SLC35A1P78382 337 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 TXNL4AP83876 142 aaKnown RBP18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 DPY19L1Q2PZI1 675 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 UGT3A2Q3SY77 523 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 SEZ6L2Q6UXD5 910 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 CASP12Q6UXS9 341 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 OR4A15Q8NGL6 344 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 KLHDC3Q9BQ90 382 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 ZNF350Q9GZX5 532 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 MYOZ1Q9NP98 299 aaPredicted RBP18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 EXOSC3Q9NQT5 275 aaKnown RBP18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 TMEM181Q9P2C4 612 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 DCTN4Q9UJW0 460 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 PRDM4Q9UKN5 801 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 KCNE3Q9Y6H6 103 aa18.53■□□□□ 0.56
SQSTM1-210ENST00000506042 IGHV4-30-2A0A087WSY4 118 aa18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 NDUFS8O00217 210 aa18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 PHF1O43189 567 aaPredicted RBP18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 UGT2B17O75795 530 aa18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 NUDT17P0C025 328 aa18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 APOBEC3AP31941 199 aaPredicted RBP18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 CHI3L1P36222 383 aaPredicted RBP18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 OR2B6P58173 313 aa18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 PRPS1P60891 318 aa18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 IRX1P78414 480 aaPredicted RBP18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 EMX2Q04743 252 aa18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 ATG4DQ86TL0 474 aaPredicted RBP18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 CMIPQ8IY22 773 aa18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 TRIML2Q8N7C3 387 aa18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 MIPOL1Q8TD10 442 aa18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 XAGE5Q8WWM1 108 aa18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 DPY30Q9C005 99 aa18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 C12orf65Q9H3J6 166 aaKnown RBP18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 NPAP1Q9NZP6 1156 aa18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 ING1Q9UK53 422 aaPredicted RBP18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 KCNS2Q9ULS6 477 aa18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 SLC25A15Q9Y619 301 aa18.52■□□□□ 0.56
SQSTM1-210ENST00000506042 VSTM5A8MXK1 200 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 ESPNB1AK53 854 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 KIAA0513O60268 411 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 KRT33AO76009 404 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 F12P00748 615 aaPredicted RBP18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 IGHV3-9P01782 118 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 ERCC1P07992 297 aaPredicted RBP18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 USF1P22415 310 aaPredicted RBP18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 UQCRC2P22695 453 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 RYKP34925 604 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 THBS2P35442 1172 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 GPAT3Q53EU6 434 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 PHC2Q8IXK0 858 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 KRTCAP2Q8N6L1 136 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 ZNF540Q8NDQ6 660 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 NANOS1Q8WY41 292 aaKnown RBP18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 ZNF75CPQ92670 426 aaPredicted RBP18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 MUS81Q96NY9 551 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 PIMREGQ9BSJ6 248 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 OR51I1Q9H343 314 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 CACYBPQ9HB71 228 aaKnown RBP18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 ASIC5Q9NY37 505 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 ZANQ9Y493 2812 aa18.51■□□□□ 0.55
SQSTM1-210ENST00000506042 FREM1Q5H8C1 2179 aa18.5■□□□□ 0.55
SQSTM1-210ENST00000506042 E7EQL1 145 aa18.5■□□□□ 0.55
SQSTM1-210ENST00000506042 G6PDP11413 515 aa18.5■□□□□ 0.55
SQSTM1-210ENST00000506042 PDLIM4P50479 330 aa18.5■□□□□ 0.55
SQSTM1-210ENST00000506042 POLR2HP52434 150 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms