RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 LIPT1Q9Y234 373 aa10.67□□□□□ -0.7
PDLIM7-214ENST00000505746 NOSIPQ9Y314 301 aaKnown RBP10.67□□□□□ -0.7
PDLIM7-214ENST00000505746 PCNX3Q9H6A9 2034 aa10.67□□□□□ -0.7
PDLIM7-214ENST00000505746 OR5H1A6NKK0 313 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 PGM3O95394 542 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 IGHV1-2P23083 117 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 IDH2P48735 452 aaKnown RBP10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 GYS2P54840 703 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 CHRNEQ04844 493 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 TNK1Q13470 666 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 GNA13Q14344 377 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 CEP85LQ5SZL2 805 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 ABLIM2Q6H8Q1 611 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 OGFOD2Q6N063 350 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 SPATA19Q7Z5L4 167 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 CMIPQ8IY22 773 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 KBTBD8Q8NFY9 601 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 PMM1Q92871 262 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 NEUROG1Q92886 237 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 APH1AQ96BI3 265 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 ZG16BQ96DA0 208 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 RADILQ96JH8 1075 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 TRNT1Q96Q11 434 aaKnown RBP10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 PANX1Q96RD7 426 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 ZBTB18Q99592 522 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 PAIP2Q9BPZ3 127 aaKnown RBP10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 TRIM2Q9C040 744 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 MTHFD2LQ9H903 347 aaPredicted RBP10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 PNPOQ9NVS9 261 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 CISD1Q9NZ45 108 aaKnown RBP10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 TRAPPC4Q9Y296 219 aa10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 MAGED1Q9Y5V3 778 aaPredicted RBP10.66□□□□□ -0.7
PDLIM7-214ENST00000505746 CIB4A0PJX0 185 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 CCDC154A6NI56 674 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 CCT8L1PA6NM43 557 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 ZNF716A6NP11 495 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 HMGN4O00479 90 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 POLR3GO15318 223 aaPredicted RBP10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 EIF1BO60739 113 aaKnown RBP10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 MRPL33O75394 65 aaKnown RBP10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 UQCRBP14927 111 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 EDNRAP25101 427 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 MAGEA8P43361 318 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 MAP2K6P52564 334 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 SLC16A1P53985 500 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 OR2B6P58173 313 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 UFM1P61960 85 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 FUT5Q11128 374 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 VEZF1Q14119 521 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 MPP2Q14168 576 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 TNFAIP8L3Q5GJ75 292 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 HHATQ5VTY9 493 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 SEZ6L2Q6UXD5 910 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 TMEM108Q6UXF1 575 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 LRRC74BQ6ZQY2 392 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 ZNF621Q6ZSS3 439 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 ATG4DQ86TL0 474 aaPredicted RBP10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 RNF130Q86XS8 419 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 ADGRG3Q86Y34 549 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 ZNF433Q8N7K0 673 aaPredicted RBP10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 DDIT4LQ96D03 193 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 ARL5BQ96KC2 179 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 OR52E6Q96RD3 313 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 NAA11Q9BSU3 229 aaPredicted RBP10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 GRIP2Q9C0E4 1043 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 ASB6Q9NWX5 421 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 TMEM181Q9P2C4 612 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 MGAT4BQ9UQ53 548 aa10.65□□□□□ -0.7
PDLIM7-214ENST00000505746 TMED7-TICAM2A0A0A6YYA0 188 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 PRAMEF27A3QJZ7 478 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 AGAP5A6NIR3 686 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 CLDN24A6NM45 220 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 INAFM1C9JVW0 142 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 ABCD4O14678 606 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 ZNF208O43345 1280 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 BCAS1O75363 584 aaPredicted RBP10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 KRT75O95678 551 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 IGHV3-9P01782 118 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 PGRP06401 933 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 NR2F1P10589 423 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 IL7RP16871 459 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 CCNA2P20248 432 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 CDKN1AP38936 164 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 POLR2HP52434 150 aaKnown RBP10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 NME5P56597 212 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 SLC35A1P78382 337 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 BST1Q10588 318 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 FAPQ12884 760 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 SYPL1Q16563 259 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 PGGHGQ32M88 737 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 AGAP6Q5VW22 663 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 OR7E24Q6IFN5 339 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 KLHL17Q6TDP4 642 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 HMGN2P46Q86SG4 172 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 ANKFN1Q8N957 763 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 GLB1L3Q8NCI6 653 aaPredicted RBP10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 WDR60Q8WVS4 1066 aa10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 CNOT9Q92600 299 aaKnown RBP10.64□□□□□ -0.71
PDLIM7-214ENST00000505746 TEX37Q96LM6 180 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms