RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SSX8Q7RTT4 187 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 HMGN2P46Q86SG4 172 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 PEX5LQ8IYB4 626 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 ANKFN1Q8N957 763 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 PIWIL2Q8TC59 973 aaKnown RBP10.61□□□□□ -0.71
MED28-203ENST00000503945 TMEM171Q8WVE6 324 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 MUCL1Q96DR8 90 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 PSD2Q9BQI7 771 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 CXorf56Q9H5V9 222 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 TMBIM4Q9HC24 238 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 CTPS2Q9NRF8 586 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 EMC3Q9P0I2 261 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 CHRNA9Q9UGM1 479 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 ZNF232Q9UNY5 417 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 TRAPPC4Q9Y296 219 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 HDGFL3Q9Y3E1 203 aa10.61□□□□□ -0.71
MED28-203ENST00000503945 PRAMEF27A3QJZ7 478 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 TMEM247A6NEH6 219 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 CLDN24A6NM45 220 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 FAM171A2A8MVW0 826 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 H7C1Q1 480 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 GPR171O14626 319 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 SMAD9O15198 467 aaKnown RBP10.6□□□□□ -0.71
MED28-203ENST00000503945 UBDO15205 165 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 TMCC2O75069 709 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 CNOT4O95628 575 aaKnown RBP10.6□□□□□ -0.71
MED28-203ENST00000503945 PMS2P2O95744 297 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 PLAUP00749 431 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 DBIP07108 87 aaKnown RBP10.6□□□□□ -0.71
MED28-203ENST00000503945 CD3EP07766 207 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 CDKN2CP42773 168 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 CRATP43155 626 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 OR2B6P58173 313 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 PDCD4Q53EL6 469 aaKnown RBP10.6□□□□□ -0.71
MED28-203ENST00000503945 Q5PR19 223 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 BEND6Q5SZJ8 279 aaPredicted RBP10.6□□□□□ -0.71
MED28-203ENST00000503945 P2RY8Q86VZ1 359 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 UBE2J2Q8N2K1 259 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 ZNF611Q8N823 705 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 FAM71CQ8NEG0 241 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 PNPT1Q8TCS8 783 aaKnown RBP10.6□□□□□ -0.71
MED28-203ENST00000503945 CNOT9Q92600 299 aaKnown RBP10.6□□□□□ -0.71
MED28-203ENST00000503945 AKAP1Q92667 903 aaKnown RBP eCLIP10.6□□□□□ -0.71
MED28-203ENST00000503945 ZNF75CPQ92670 426 aaPredicted RBP10.6□□□□□ -0.71
MED28-203ENST00000503945 DDIT4LQ96D03 193 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 PERPQ96FX8 193 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 ITCHQ96J02 903 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 COX4I2Q96KJ9 171 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 NAA11Q9BSU3 229 aaPredicted RBP10.6□□□□□ -0.71
MED28-203ENST00000503945 THUMPD1Q9NXG2 353 aaKnown RBP10.6□□□□□ -0.71
MED28-203ENST00000503945 CALML5Q9NZT1 146 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 ZIM2Q9NZV7 527 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 TMEM181Q9P2C4 612 aa10.6□□□□□ -0.71
MED28-203ENST00000503945 ING1Q9UK53 422 aaPredicted RBP10.6□□□□□ -0.71
MED28-203ENST00000503945 TMED7-TICAM2A0A0A6YYA0 188 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 CFAP73A6NFT4 308 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 HS3ST1O14792 307 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 KLF11O14901 512 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 SMAD7O15105 426 aaKnown RBP10.59□□□□□ -0.71
MED28-203ENST00000503945 CLOCKO15516 846 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 ZNF208O43345 1280 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 EIF1BO60739 113 aaKnown RBP10.59□□□□□ -0.71
MED28-203ENST00000503945 BCAS1O75363 584 aaPredicted RBP10.59□□□□□ -0.71
MED28-203ENST00000503945 MRPL33O75394 65 aaKnown RBP10.59□□□□□ -0.71
MED28-203ENST00000503945 C1QCP02747 245 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 PCSK6P29122 969 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 SLC1A3P43003 542 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 POLR2HP52434 150 aaKnown RBP10.59□□□□□ -0.71
MED28-203ENST00000503945 POLR2JP52435 117 aaKnown RBP10.59□□□□□ -0.71
MED28-203ENST00000503945 SLC35A1P78382 337 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 FUT5Q11128 374 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 TAB1Q15750 504 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 SLC9B1Q4ZJI4 515 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 COX20Q5RI15 118 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 NCMAPQ5T1S8 102 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 FBXW9Q5XUX1 488 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 YTHDF3Q7Z739 585 aaKnown RBP10.59□□□□□ -0.71
MED28-203ENST00000503945 ZNF440Q8IYI8 595 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 MIER2Q8N344 545 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 WDR60Q8WVS4 1066 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 TLCD1Q96CP7 247 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 MAELQ96JY0 434 aaKnown RBP10.59□□□□□ -0.71
MED28-203ENST00000503945 ARL5BQ96KC2 179 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 Q96MF0 132 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 ZNF300Q96RE9 604 aaPredicted RBP10.59□□□□□ -0.71
MED28-203ENST00000503945 TMEM204Q9BSN7 226 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 GSX2Q9BZM3 304 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 SLC38A1Q9H2H9 487 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 ARMC7Q9H6L4 198 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 TPT1P8Q9HAU6 139 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 CACYBPQ9HB71 228 aaKnown RBP10.59□□□□□ -0.71
MED28-203ENST00000503945 SDR39U1Q9NRG7 319 aaPredicted RBP10.59□□□□□ -0.71
MED28-203ENST00000503945 PARPBPQ9NWS1 579 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 PRSS50Q9UI38 385 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 LAMP3Q9UQV4 416 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 NOSIPQ9Y314 301 aaKnown RBP10.59□□□□□ -0.71
MED28-203ENST00000503945 TMED7Q9Y3B3 224 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 RNF115Q9Y4L5 304 aa10.59□□□□□ -0.71
MED28-203ENST00000503945 IGKV3D-15A0A087WSY6 115 aa10.58□□□□□ -0.72
MED28-203ENST00000503945 CIB4A0PJX0 185 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms