RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 DNPH1O43598 174 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 PMS2P2O95744 297 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 CDH2P19022 906 aaPredicted RBP13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 TAC1P20366 129 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 SESN3P58005 492 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 IL1RL1Q01638 556 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 ADRM1Q16186 407 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 HIKESHIQ53FT3 197 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 EXOSC6Q5RKV6 272 aaKnown RBP13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 TSPO2Q5TGU0 170 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 CCDC103Q8IW40 242 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 OR4F15Q8NGB8 312 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 OR51F2Q8NH61 342 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 CLDND2Q8NHS1 167 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 FBXO25Q8TCJ0 367 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 KCNA7Q96RP8 456 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 DOK1Q99704 481 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 THUMPD3Q9BV44 507 aaKnown RBP13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 CDC42EP4Q9H3Q1 356 aaKnown RBP13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 SLC9A8Q9Y2E8 581 aa13.71□□□□□ -0.21
PDLIM7-210ENST00000503827 SH3PXD2BA1X283 911 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 LYNX1G3V0Z9 82 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 CYP7B1O75881 506 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 BCL10O95999 233 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 PNPP00491 289 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 TFP02787 698 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 HMGN2P05204 90 aaKnown RBP13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 LYNX1P0DP58 116 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 HKR1P10072 659 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 NPR2P20594 1047 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 NAAAQ02083 359 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 LCP2Q13094 533 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 LASP1Q14847 261 aaKnown RBP13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 DCST2Q5T1A1 773 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 SPATA21Q7Z572 469 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 TMEM151AQ8N4L1 468 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 PPCDCQ96CD2 204 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 ZNF764Q96H86 408 aaPredicted RBP13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 TMEM237Q96Q45 408 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 NARFLQ9H6Q4 476 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 ZNF442Q9H7R0 627 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 ACSS1Q9NUB1 689 aaPredicted RBP13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 ZCCHC3Q9NUD5 404 aaKnown RBP13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 SH3BP4Q9P0V3 963 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 HDGFL3Q9Y3E1 203 aa13.7□□□□□ -0.22
PDLIM7-210ENST00000503827 LOC105371242A0A075B767 164 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 TRAV20A0A0B4J274 112 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 IMPDH1P20839 514 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 PHBP35232 272 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 FRKP42685 505 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 GPR6P46095 362 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 UBE2NP61088 152 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 ZNF385BQ569K4 471 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 ANKRD16Q6P6B7 361 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 ABHD12BQ7Z5M8 362 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 ZDHHC22Q8N966 263 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 NUP37Q8NFH4 326 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 ADAMTS15Q8TE58 950 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 FAM120BQ96EK7 910 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 DNAJA3Q96EY1 480 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 BOD1Q96IK1 185 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 ANKRD27Q96NW4 1050 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 LAT2Q9GZY6 243 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 DDX28Q9NUL7 540 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 ACER3Q9NUN7 267 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 ARMCX1Q9P291 453 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 FLVCR1Q9Y5Y0 555 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 SAR1BQ9Y6B6 198 aa13.69□□□□□ -0.22
PDLIM7-210ENST00000503827 NPIPB9F8W1W9 429 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 ZSCAN12O43309 604 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 TBX19O60806 448 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 DNAJA2O60884 412 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 RSL1D1O76021 490 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 INHBAP08476 426 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 ARAFP10398 606 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 SAGP10523 405 aaPredicted RBP13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 FKBP2P26885 142 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 THBS4P35443 961 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 APOBEC1P41238 236 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 OR2B6P58173 313 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 UBA52P62987 128 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 C3orf36Q3SXR2 165 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 HIST2H2BDQ6DRA6 164 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 BPIFB2Q8N4F0 458 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 CKAP2Q8WWK9 683 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 ARL5BQ96KC2 179 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 SLC6A7Q99884 636 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 REEP4Q9H6H4 257 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 MID1IP1Q9NPA3 183 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 ESM1Q9NQ30 184 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 RRAGDQ9NQL2 400 aaPredicted RBP13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 TMEM45AQ9NWC5 275 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 CHRNA9Q9UGM1 479 aa13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 UTP11Q9Y3A2 253 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-210ENST00000503827 TMEM129A0AVI4 362 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 ANKRD28O15084 1053 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 RAD51CO43502 376 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 AKAP10O43572 662 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 SEC22BO75396 215 aa13.67□□□□□ -0.22
PDLIM7-210ENST00000503827 ADRA2AP08913 450 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms