RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 SCN3BQ9NY72 215 aa8.26□□□□□ -1.09
NR1I3-216ENST00000502848 CNOT2Q9NZN8 540 aaKnown RBP8.26□□□□□ -1.09
NR1I3-216ENST00000502848 NDUFA13Q9P0J0 144 aa8.26□□□□□ -1.09
NR1I3-216ENST00000502848 PPP4R1LQ9P1A2 415 aa8.26□□□□□ -1.09
NR1I3-216ENST00000502848 ZNF229Q9UJW7 825 aa8.26□□□□□ -1.09
NR1I3-216ENST00000502848 SIGLEC7Q9Y286 467 aa8.26□□□□□ -1.09
NR1I3-216ENST00000502848 NTNG1Q9Y2I2 539 aa8.26□□□□□ -1.09
NR1I3-216ENST00000502848 SLC6A5Q9Y345 797 aa8.26□□□□□ -1.09
NR1I3-216ENST00000502848 MRPS18CQ9Y3D5 142 aaKnown RBP8.26□□□□□ -1.09
NR1I3-216ENST00000502848 PCDHGB1Q9Y5G3 927 aa8.26□□□□□ -1.09
NR1I3-216ENST00000502848 SCN2AQ99250 2005 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 CCDC88CQ9P219 2028 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 ZNF292O60281 2723 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 EXPH5Q8NEV8 1989 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 IGKV1D-42A0A075B6H8 117 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 TRAV36DV7A0A075B6V5 113 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 IRGMA1A4Y4 181 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 NPIPB13A6NJU9 1138 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 ENO4A6NNW6 628 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 ZNF891A8MT65 544 aaPredicted RBP8.25□□□□□ -1.09
NR1I3-216ENST00000502848 NPIPB4C9JG80 1138 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 SLC1A7O00341 560 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 CDC42EP2O14613 210 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 OIP5O43482 229 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 NPIPB7O75200 414 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 PTP4A3O75365 173 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 OR7A10O76100 309 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 CLPTM1O96005 669 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 PIPP12273 146 aaPredicted RBP8.25□□□□□ -1.09
NR1I3-216ENST00000502848 ZNF17P17021 662 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 PRKCAP17252 672 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 GABRB1P18505 474 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 CXCR1P25024 350 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 EPHA2P29317 976 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 TACR3P29371 465 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 SLC6A6P31641 620 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 PCYT1AP49585 367 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 NR1H2P55055 460 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 TMED1Q13445 227 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 QPRTQ15274 297 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 PGGHGQ32M88 737 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 NDUFAF6Q330K2 333 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 ZBED5Q49AG3 693 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 FAM69AQ5T7M9 428 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 ABHD17BQ5VST6 288 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 ZNF773Q6PK81 442 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 PRICKLE2Q7Z3G6 844 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 OAFQ86UD1 273 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 PLCZ1Q86YW0 608 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 CCDC71Q8IV32 467 aaPredicted RBP8.25□□□□□ -1.09
NR1I3-216ENST00000502848 LNX2Q8N448 690 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 GATSQ8NAP1 163 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 OR2M3Q8NG83 312 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 PSMF1Q92530 271 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 GPA33Q99795 319 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 POTEKPQ9BYX7 375 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 RTN4RQ9BZR6 473 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 DUSP21Q9H596 190 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 VCX3AQ9NNX9 186 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 TBC1D23Q9NUY8 699 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 CLN6Q9NWW5 311 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 OSGIN1Q9UJX0 560 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 HIF3AQ9Y2N7 669 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 CORINQ9Y5Q5 1042 aa8.25□□□□□ -1.09
NR1I3-216ENST00000502848 EP300Q09472 2414 aaPredicted RBP8.25□□□□□ -1.09
NR1I3-216ENST00000502848 KIF26BQ2KJY2 2108 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 CUL9Q8IWT3 2517 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 EFCAB10A6NFE3 127 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 LINC01387J3KSC0 135 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 DLL1O00548 723 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 IMPA2O14732 288 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 ARPC3O15145 178 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 TRIM3O75382 744 aaPredicted RBP8.24□□□□□ -1.09
NR1I3-216ENST00000502848 WBP4O75554 376 aaKnown RBP8.24□□□□□ -1.09
NR1I3-216ENST00000502848 SLC25A12O75746 678 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 CBR3O75828 277 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 NDUFB2O95178 105 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 SOX14O95416 240 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 CLIC3O95833 236 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 NUDT14O95848 222 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 P04436 131 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 SMIM18P0DKX4 95 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 SAGP10523 405 aaPredicted RBP8.24□□□□□ -1.09
NR1I3-216ENST00000502848 PEPDP12955 493 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 LIFP15018 202 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 MAKP20794 623 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 GPR4P46093 362 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 RPL5P46777 297 aaKnown RBP8.24□□□□□ -1.09
NR1I3-216ENST00000502848 CYB561P49447 251 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 DSCR4P56555 118 aaPredicted RBP8.24□□□□□ -1.09
NR1I3-216ENST00000502848 PRSS12P56730 875 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 SLC35A2P78381 396 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 MVKQ03426 396 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 CRYZQ08257 329 aaKnown RBP8.24□□□□□ -1.09
NR1I3-216ENST00000502848 GINS1Q14691 196 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 ZNF74Q16587 644 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 CTU2Q2VPK5 515 aaKnown RBP8.24□□□□□ -1.09
NR1I3-216ENST00000502848 PLPPR5Q32ZL2 321 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 EMC4Q5J8M3 183 aa8.24□□□□□ -1.09
NR1I3-216ENST00000502848 ARMC4Q5T2S8 1044 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms