RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 PXKQ7Z7A4 578 aa15.24■□□□□ 0.03
VCAN-204ENST00000502527 OR52E2Q8NGJ4 325 aa15.24■□□□□ 0.03
VCAN-204ENST00000502527 TCTN2Q96GX1 697 aa15.24■□□□□ 0.03
VCAN-204ENST00000502527 ZNF578Q96N58 590 aaPredicted RBP15.24■□□□□ 0.03
VCAN-204ENST00000502527 TTYH2Q9BSA4 534 aa15.24■□□□□ 0.03
VCAN-204ENST00000502527 TMEM165Q9HC07 324 aa15.24■□□□□ 0.03
VCAN-204ENST00000502527 FAM240BA0A1B0GVZ2 78 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 GLULP15104 373 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 PYCR1P32322 319 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 SRSF5Q13243 272 aaKnown RBP15.23■□□□□ 0.03
VCAN-204ENST00000502527 FAM53BQ14153 422 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 DMKNQ6E0U4 476 aaPredicted RBP15.23■□□□□ 0.03
VCAN-204ENST00000502527 SFXN4Q6P4A7 337 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 TRILQ7L0X0 811 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 DNAJC5GQ8N7S2 189 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 TEX19Q8NA77 164 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 SMRP1Q8NCR6 262 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 C17orf47Q8NEP4 570 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 OR6C4Q8NGE1 309 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 UBASH3BQ8TF42 649 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 SMAP2Q8WU79 429 aaPredicted RBP15.23■□□□□ 0.03
VCAN-204ENST00000502527 ENAMQ9NRM1 1142 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 NUFIP1Q9UHK0 495 aaKnown RBP15.23■□□□□ 0.03
VCAN-204ENST00000502527 OR10H1Q9Y4A9 318 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 A0A0B4J293 547 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 A0A1W2PPC4 97 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 FAM172BPA6NC97 362 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 PPM1BO75688 479 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 SC5DO75845 299 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 NSA2O95478 260 aaKnown RBP15.23■□□□□ 0.03
VCAN-204ENST00000502527 SERPINA3P01011 423 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 CT45A8P0DMV1 189 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 CT45A9P0DMV2 189 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 HIST1H1CP16403 213 aaKnown RBP15.23■□□□□ 0.03
VCAN-204ENST00000502527 ACVR1BP36896 505 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 GPR3P46089 330 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 MRPS15P82914 257 aaKnown RBP15.23■□□□□ 0.03
VCAN-204ENST00000502527 ACSM3Q53FZ2 586 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 CT45A2Q5DJT8 189 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 POMGNT2Q8NAT1 580 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 OR4K13Q8NH42 304 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 GHSRQ92847 366 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 RNF31Q96EP0 1072 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 PGLYRP3Q96LB9 341 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 DMRTB1Q96MA1 342 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 LRRC61Q9BV99 259 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 ICAM5Q9UMF0 924 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 RASD1Q9Y272 281 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 IER3IP1Q9Y5U9 82 aa15.23■□□□□ 0.03
VCAN-204ENST00000502527 A0A087WUJ7 227 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 A0A0G2JMP0 313 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 A0A0X1KG70 313 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 SERINC4A6NH21 518 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 GNB5O14775 395 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 ZNF749O43361 778 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 CSTAP01040 98 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 OR2T7P0C7T2 308 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 FAM157BP0CG42 384 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 THBS2P35442 1172 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 MAZP56270 477 aaKnown RBP15.22■□□□□ 0.03
VCAN-204ENST00000502527 ACTA2P62736 377 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 ACTG2P63267 376 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 BTG2P78543 158 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 MAT1AQ00266 395 aaKnown RBP15.22■□□□□ 0.03
VCAN-204ENST00000502527 LGALS3BPQ08380 585 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 ERV3-1Q14264 604 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 FAM27D1Q5T7N8 215 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 COL13A1Q5TAT6 717 aaPredicted RBP15.22■□□□□ 0.03
VCAN-204ENST00000502527 ZNF57Q68EA5 555 aaPredicted RBP15.22■□□□□ 0.03
VCAN-204ENST00000502527 PAMR1Q6UXH9 720 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 RPTNQ6XPR3 784 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 BCORP1Q8N888 145 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 SDR9C7Q8NEX9 313 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 OR4M2Q8NGB6 313 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 OR2T27Q8NH04 317 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 OR5J2Q8NH18 312 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 C16orf52Q8NHV5 167 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 FAM174AQ8TBP5 190 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 ZMYND19Q96E35 227 aaPredicted RBP15.22■□□□□ 0.03
VCAN-204ENST00000502527 CNN2Q99439 309 aaKnown RBP15.22■□□□□ 0.03
VCAN-204ENST00000502527 WSB2Q9NYS7 404 aaPredicted RBP15.22■□□□□ 0.03
VCAN-204ENST00000502527 LRIT1Q9P2V4 623 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 ERVK-19Q9WJR5 959 aa15.22■□□□□ 0.03
VCAN-204ENST00000502527 NPR2P20594 1047 aa15.21■□□□□ 0.03
VCAN-204ENST00000502527 RBMS1P29558 406 aaKnown RBP15.21■□□□□ 0.03
VCAN-204ENST00000502527 RCVRNP35243 200 aa15.21■□□□□ 0.03
VCAN-204ENST00000502527 PGDP52209 483 aa15.21■□□□□ 0.03
VCAN-204ENST00000502527 FUT7Q11130 342 aa15.21■□□□□ 0.03
VCAN-204ENST00000502527 GGTLC2Q14390 218 aa15.21■□□□□ 0.03
VCAN-204ENST00000502527 TATDN3Q17R31 274 aa15.21■□□□□ 0.03
VCAN-204ENST00000502527 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.21■□□□□ 0.03
VCAN-204ENST00000502527 DPY19L2P2Q6ZN68 376 aa15.21■□□□□ 0.03
VCAN-204ENST00000502527 SSX6Q7RTT6 188 aa15.21■□□□□ 0.03
VCAN-204ENST00000502527 SYS1Q8N2H4 156 aa15.21■□□□□ 0.03
VCAN-204ENST00000502527 SAMD12Q8N8I0 201 aa15.21■□□□□ 0.03
VCAN-204ENST00000502527 MAP3K3Q99759 626 aa15.21■□□□□ 0.03
VCAN-204ENST00000502527 HDHD2Q9H0R4 259 aa15.21■□□□□ 0.03
VCAN-204ENST00000502527 OR10A5Q9H207 317 aa15.21■□□□□ 0.03
VCAN-204ENST00000502527 NLKQ9UBE8 527 aa15.21■□□□□ 0.03
VCAN-204ENST00000502527 ST6GALNAC2Q9UJ37 374 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms