RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 HIST1H1CP16403 213 aaKnown RBP9.07□□□□□ -0.96
CLIP1-204ENST00000501271 CD53P19397 219 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 SLC6A6P31641 620 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 RBM34P42696 430 aaKnown RBP9.07□□□□□ -0.96
CLIP1-204ENST00000501271 RABIFP47224 123 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 INPP1P49441 399 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 HHEXQ03014 270 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 KIR2DS5Q14953 304 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 SLC25A35Q3KQZ1 300 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 DMKNQ6E0U4 476 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-204ENST00000501271 ARHGAP11AQ6P4F7 1023 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 LINC00114Q6XXX2 140 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 RTL4Q6ZR62 310 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 LSMEM1Q8N8F7 131 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 ASCC1Q8N9N2 400 aaKnown RBP9.07□□□□□ -0.96
CLIP1-204ENST00000501271 OR52E2Q8NGJ4 325 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 OR51L1Q8NGJ5 315 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 TRIM63Q969Q1 353 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 ZMYND19Q96E35 227 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-204ENST00000501271 SPACA7Q96KW9 195 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 ERMAPQ96PL5 475 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-204ENST00000501271 LRRN3Q9H3W5 708 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 SYNDIG1Q9H7V2 258 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 KLHL1Q9NR64 748 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 CHRNA9Q9UGM1 479 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 ST6GALNAC2Q9UJ37 374 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 POMT2Q9UKY4 750 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 BAIAP2Q9UQB8 552 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 SLCO1B1Q9Y6L6 691 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 VCANP13611 3396 aa9.07□□□□□ -0.96
CLIP1-204ENST00000501271 A0A1W2PRG6 482 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 TAS2R43P59537 309 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 MAT1AQ00266 395 aaKnown RBP9.06□□□□□ -0.96
CLIP1-204ENST00000501271 FGFBP1Q14512 234 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 ZNHIT3Q15649 155 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-204ENST00000501271 TP53I3Q53FA7 332 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 Q5BKY6 102 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 LRRC17Q8N6Y2 441 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 RCBTB1Q8NDN9 531 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 OR4K13Q8NH42 304 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 GHSRQ92847 366 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 RIT1Q92963 219 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 SMAD5Q99717 465 aaKnown RBP9.06□□□□□ -0.96
CLIP1-204ENST00000501271 TMEM246Q9BRR3 403 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 MARVELD1Q9BSK0 173 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 TRIM2Q9C040 744 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 SEMA6CQ9H3T2 930 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 CCDC86Q9H6F5 360 aaKnown RBP9.06□□□□□ -0.96
CLIP1-204ENST00000501271 SLC28A3Q9HAS3 691 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 THADAQ6YHU6 1953 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 MYO15AQ9UKN7 3530 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 SLC9B1P1A6NJY1 282 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 MCIDASD6RGH6 385 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 NPIPB9F8W1W9 429 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 PRAMEF26H0Y7S4 382 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 IMPA2O14732 288 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 IFNGP01579 166 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 YES1P07947 543 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 S100A1P23297 94 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 RBMS1P29558 406 aaKnown RBP9.06□□□□□ -0.96
CLIP1-204ENST00000501271 ACTC1P68032 377 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 ACTA1P68133 377 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 ERV3-1Q14264 604 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 FZD2Q14332 565 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 GPR176Q14439 515 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 TRAM1Q15629 374 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 CCDC85BQ15834 202 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-204ENST00000501271 GXYLT1Q4G148 440 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 ACSM3Q53FZ2 586 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 C6orf183Q5T699 404 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 YIPF7Q8N8F6 280 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 C19orf47Q8N9M1 422 aaKnown RBP9.06□□□□□ -0.96
CLIP1-204ENST00000501271 FAM98AQ8NCA5 519 aaKnown RBP9.06□□□□□ -0.96
CLIP1-204ENST00000501271 TRMT10AQ8TBZ6 339 aaKnown RBP9.06□□□□□ -0.96
CLIP1-204ENST00000501271 SLC2A12Q8TD20 617 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 ZNRF4Q8WWF5 429 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 KCTD12Q96CX2 325 aaKnown RBP9.06□□□□□ -0.96
CLIP1-204ENST00000501271 HDHD2Q9H0R4 259 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 TRPV5Q9NQA5 729 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 CD207Q9UJ71 328 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 SERTAD3Q9UJW9 196 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 ADAM18Q9Y3Q7 739 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 CLDN16Q9Y5I7 305 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 LAMA1P25391 3075 aa9.06□□□□□ -0.96
CLIP1-204ENST00000501271 SPTY2D1-AS1A0A0U1RR47 76 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 A0A1W2PPK0 400 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 OR5K4A6NMS3 321 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 B4DGG1 531 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 ARSBP15848 533 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 NPR2P20594 1047 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 TALDO1P37837 337 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 NAA10P41227 235 aaPredicted RBP9.05□□□□□ -0.96
CLIP1-204ENST00000501271 NRG3P56975 720 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 RAB25P57735 213 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 BTG2P78543 158 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 POU4F2Q12837 409 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 STX4Q12846 297 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 ZNF141Q15928 474 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 ULK3Q6PHR2 472 aa9.05□□□□□ -0.96
CLIP1-204ENST00000501271 ASB18Q6ZVZ8 466 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms