RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 ESRRGP62508 458 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 PRKCDQ05655 676 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 TSPAN31Q12999 210 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 MED21Q13503 144 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 KLHL17Q6TDP4 642 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 ZNF227Q86WZ6 799 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 NRMQ8IXM6 262 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 ZNF563Q8TA94 476 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 GNPDA2Q8TDQ7 276 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 TMEM234Q8WY98 164 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 TMEM41AQ96HV5 264 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 TMEM43Q9BTV4 400 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 SLC19A3Q9BZV2 496 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 UCK2Q9BZX2 261 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 GRIP2Q9C0E4 1043 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 PROK2Q9HC23 129 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 FAM118AQ9NWS6 357 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 TAS2R10Q9NYW0 307 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 STMN3Q9NZ72 180 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 TMEM5Q9Y2B1 443 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 MED31Q9Y3C7 131 aa12.89□□□□□ -0.35
VPS26A-209ENST00000497564 FLNBO75369 2602 aaKnown RBP12.89□□□□□ -0.35
VPS26A-209ENST00000497564 B4DXG7 233 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 SNPHO15079 494 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 CEACAM4O75871 244 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 SNX4O95219 450 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 MYF6P23409 242 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 CASRP41180 1078 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 HTR3AP46098 478 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 LSM11P83369 360 aaKnown RBP eCLIP12.88□□□□□ -0.35
VPS26A-209ENST00000497564 ALDH6A1Q02252 535 aaKnown RBP12.88□□□□□ -0.35
VPS26A-209ENST00000497564 NPRL3Q12980 569 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 IL18R1Q13478 541 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 KEAP1Q14145 624 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 QPRTQ15274 297 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 ZIK1Q3SY52 487 aaPredicted RBP12.88□□□□□ -0.35
VPS26A-209ENST00000497564 SLC25A53Q5H9E4 307 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 TTC33Q6PID6 262 aaPredicted RBP12.88□□□□□ -0.35
VPS26A-209ENST00000497564 ASB18Q6ZVZ8 466 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 GRINAQ7Z429 371 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 GALNT5Q7Z7M9 940 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 WDSUB1Q8N9V3 476 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 ZNF555Q8NEP9 628 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 FDCSPQ8NFU4 85 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 OR2M3Q8NG83 312 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 CYGBQ8WWM9 190 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 GTPBP3Q969Y2 492 aaKnown RBP12.88□□□□□ -0.35
VPS26A-209ENST00000497564 ZNF524Q96C55 264 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 PITX2Q99697 317 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 KLHDC3Q9BQ90 382 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 RNF32Q9H0A6 362 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 SACM1LQ9NTJ5 587 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 REV1Q9UBZ9 1251 aa12.88□□□□□ -0.35
VPS26A-209ENST00000497564 RP1L1Q8IWN7 2480 aaPredicted RBP12.88□□□□□ -0.35
VPS26A-209ENST00000497564 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 LOC100130705A0A1B0GUX0 176 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 ELOA3DA6NLF2 546 aaPredicted RBP12.87□□□□□ -0.35
VPS26A-209ENST00000497564 J3QKU1 62 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 PIP5K1CO60331 668 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 NTN1O95631 604 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 NUDT14O95848 222 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 TP53P04637 393 aaPredicted RBP12.87□□□□□ -0.35
VPS26A-209ENST00000497564 OSMP13725 252 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 POLR2HP52434 150 aaKnown RBP12.87□□□□□ -0.35
VPS26A-209ENST00000497564 FOXD4Q12950 439 aaPredicted RBP12.87□□□□□ -0.35
VPS26A-209ENST00000497564 TUBA3CQ13748 450 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 TOMM34Q15785 309 aaPredicted RBP12.87□□□□□ -0.35
VPS26A-209ENST00000497564 ELOA3BQ3SY89 546 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 PRAMEF20Q5VT98 475 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 AGAP7PQ5VUJ5 663 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 TUBA3EQ6PEY2 450 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 ISLR2Q6UXK2 745 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 RASSF6Q6ZTQ3 369 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 TMPRSS11FQ6ZWK6 438 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 PLCZ1Q86YW0 608 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 PSD4Q8NDX1 1056 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 ELOA3Q8NG57 546 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 FAM46AQ96IP4 442 aaKnown RBP12.87□□□□□ -0.35
VPS26A-209ENST00000497564 HRASLS5Q96KN8 279 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 ZNF570Q96NI8 536 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 AGAP4Q96P64 663 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 GPA33Q99795 319 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 UTP23Q9BRU9 249 aaKnown RBP12.87□□□□□ -0.35
VPS26A-209ENST00000497564 RIBC2Q9H4K1 309 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 MEPEQ9NQ76 525 aaPredicted RBP12.87□□□□□ -0.35
VPS26A-209ENST00000497564 MED11Q9P086 117 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 HRH3Q9Y5N1 445 aa12.87□□□□□ -0.35
VPS26A-209ENST00000497564 SETXQ7Z333 2677 aaKnown RBP12.87□□□□□ -0.35
VPS26A-209ENST00000497564 IGKV1D-42A0A075B6H8 117 aa12.86□□□□□ -0.35
VPS26A-209ENST00000497564 A0A087WZY1 265 aa12.86□□□□□ -0.35
VPS26A-209ENST00000497564 C2orf72A6NCS6 295 aa12.86□□□□□ -0.35
VPS26A-209ENST00000497564 TRIM3O75382 744 aaPredicted RBP12.86□□□□□ -0.35
VPS26A-209ENST00000497564 P04436 131 aa12.86□□□□□ -0.35
VPS26A-209ENST00000497564 POU2F1P14859 743 aa12.86□□□□□ -0.35
VPS26A-209ENST00000497564 PRKCAP17252 672 aa12.86□□□□□ -0.35
VPS26A-209ENST00000497564 TACR3P29371 465 aa12.86□□□□□ -0.35
VPS26A-209ENST00000497564 CD96P40200 585 aa12.86□□□□□ -0.35
VPS26A-209ENST00000497564 CRISP1P54107 249 aa12.86□□□□□ -0.35
VPS26A-209ENST00000497564 IL1RL1Q01638 556 aa12.86□□□□□ -0.35
VPS26A-209ENST00000497564 TLE1Q04724 770 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms