RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 DNAJA4Q8WW22 397 aaPredicted RBP18.08■□□□□ 0.48
CTSD-206ENST00000497544 SMPDL3BQ92485 455 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 RAB3IPQ96QF0 476 aaPredicted RBP18.08■□□□□ 0.48
CTSD-206ENST00000497544 SEPHS2Q99611 448 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 SPRR3Q9UBC9 169 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 OSGIN1Q9UJX0 560 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 AP4B1Q9Y6B7 739 aa18.08■□□□□ 0.48
CTSD-206ENST00000497544 TMED7-TICAM2A0A0A6YYA0 188 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 A0A1B0GWA3 101 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 TCRBV5S2A0A599 114 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 AQP12BA6NM10 295 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 BCKDKO14874 412 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 NTN1O95631 604 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 CXCR1P25024 350 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 PSMA4P25789 261 aaKnown RBP18.07■□□□□ 0.48
CTSD-206ENST00000497544 ELK4P28324 431 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 DLX5P56178 289 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 WLSQ5T9L3 541 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 C1orf146Q5VVC0 180 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 ULK3Q6PHR2 472 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 SPATA24Q86W54 205 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 AQP12AQ8IXF9 295 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 FAM86B1Q8N7N1 296 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 SLC47A1Q96FL8 570 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 TIMP4Q99727 224 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 AMBRA1Q9C0C7 1298 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 TNFRSF10DQ9UBN6 386 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 TMED7Q9Y3B3 224 aa18.07■□□□□ 0.48
CTSD-206ENST00000497544 FAM32AQ9Y421 112 aaKnown RBP18.07■□□□□ 0.48
CTSD-206ENST00000497544 SPIN1Q9Y657 262 aaPredicted RBP18.07■□□□□ 0.48
CTSD-206ENST00000497544 ZNHIT1O43257 154 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 EFNA2O43921 213 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 UMPSP11172 480 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 CCNA2P20248 432 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 YAP1P46937 504 aaKnown RBP18.06■□□□□ 0.48
CTSD-206ENST00000497544 TAS2R41P59536 307 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 CHRNB3Q05901 458 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 CRYZQ08257 329 aaKnown RBP18.06■□□□□ 0.48
CTSD-206ENST00000497544 SELENBP1Q13228 472 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 BCL2A1Q16548 175 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 FAM98BQ52LJ0 330 aaKnown RBP18.06■□□□□ 0.48
CTSD-206ENST00000497544 ALG10BQ5I7T1 473 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 ZNF613Q6PF04 617 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 CYP4Z1Q86W10 505 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 ADGRG3Q86Y34 549 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 LILRA2Q8N149 483 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 ADAMTS16Q8TE57 1224 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 UTP4Q969X6 686 aaKnown RBP18.06■□□□□ 0.48
CTSD-206ENST00000497544 C3orf49Q96BT1 292 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 POM121Q96HA1 1249 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 POLR2J2Q9GZM3 115 aaKnown RBP18.06■□□□□ 0.48
CTSD-206ENST00000497544 POLR2J3Q9H1A7 115 aaKnown RBP18.06■□□□□ 0.48
CTSD-206ENST00000497544 ALKBH4Q9NXW9 302 aa18.06■□□□□ 0.48
CTSD-206ENST00000497544 TRAPPC13A5PLN9 417 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 ERICH4A6NGS2 130 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 ELOA3DA6NLF2 546 aaPredicted RBP18.05■□□□□ 0.48
CTSD-206ENST00000497544 GJE1A6NN92 205 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 OPN1LWP04000 364 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 TPOP07202 933 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 ITGA2P17301 1181 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 FKBP2P26885 142 aaKnown RBP18.05■□□□□ 0.48
CTSD-206ENST00000497544 MAP2K6P52564 334 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 SRYQ05066 204 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 ELOA3BQ3SY89 546 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 C3orf33Q6P1S2 294 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 FGD2Q7Z6J4 655 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 PM20D2Q8IYS1 436 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 UBQLNLQ8IYU4 475 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 MEIOBQ8N635 442 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 ELOA3Q8NG57 546 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 WDYHV1Q96HA8 205 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 MAGIXQ9H6Y5 334 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 TMEM185BQ9H7F4 350 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 CHRNA9Q9UGM1 479 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 CAMK2AQ9UQM7 478 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 ENPP4Q9Y6X5 453 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 MTORP42345 2549 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 MPDZO75970 2070 aa18.05■□□□□ 0.48
CTSD-206ENST00000497544 A0A0B4J2E0 115 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 A0A1B0GX12 115 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 hCG_2039718K7EN88 272 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 PRRG2O14669 202 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 TFPIP10646 304 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 PNMTP11086 282 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 PRF1P14222 555 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 CPN1P15169 458 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 NQO1P15559 274 aaKnown RBP18.04■□□□□ 0.48
CTSD-206ENST00000497544 IL11P20809 199 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 SFTPDP35247 375 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 LHX2P50458 406 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 CDH12P55289 794 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 PIN1Q13526 163 aaPredicted RBP18.04■□□□□ 0.48
CTSD-206ENST00000497544 TMEM176BQ3YBM2 270 aaPredicted RBP18.04■□□□□ 0.48
CTSD-206ENST00000497544 GXYLT1Q4G148 440 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 DCST1Q5T197 706 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 CHMP1BQ7LBR1 199 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 ATG4DQ86TL0 474 aaPredicted RBP18.04■□□□□ 0.48
CTSD-206ENST00000497544 ZDHHC21Q8IVQ6 265 aa18.04■□□□□ 0.48
CTSD-206ENST00000497544 CHERPQ8IWX8 916 aaKnown RBP18.04■□□□□ 0.48
CTSD-206ENST00000497544 OR5M9Q8NGP3 310 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms