RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 ADGRB2O60241 1585 aa3.93□□□□□ -1.78
SF3B1-212ENST00000496458 ATP7BP35670 1465 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 PXDNQ92626 1479 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 INSRP06213 1382 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 KIF1AQ12756 1690 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 A0A0A6YYD4 124 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 A0A1B0GUA9 196 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 FRG2CA6NGY1 282 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 A8MX80 341 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 F8VZ95 297 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 PDLIM1O00151 329 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 SDC3O75056 442 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 WBP4O75554 376 aaKnown RBP3.92□□□□□ -1.78
SF3B1-212ENST00000496458 LYPD3O95274 346 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 OAS1P00973 400 aaKnown RBP3.92□□□□□ -1.78
SF3B1-212ENST00000496458 PROS1P07225 676 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 SLC2A3P11169 496 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 PVRP15151 417 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 MGMTP16455 207 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 CA8P35219 290 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 NF2P35240 595 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 CDKN1BP46527 198 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 ACADVLP49748 655 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 RGS4P49798 205 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 AP3M2P53677 418 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 RPS4XP62701 263 aaKnown RBP3.92□□□□□ -1.78
SF3B1-212ENST00000496458 MAB21L1Q13394 359 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 MSLNQ13421 630 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-212ENST00000496458 HAGHQ16775 308 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 TATDN3Q17R31 274 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 QRICH1Q2TAL8 776 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 LRIT3Q3SXY7 679 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 MS4A13Q5J8X5 152 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 TCHHL1Q5QJ38 904 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-212ENST00000496458 CDC42EP5Q6NZY7 148 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 CCDC80Q76M96 950 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 PRSS48Q7RTY5 328 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 ERASQ7Z444 233 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 KIAA1328Q86T90 577 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 ARFGAP2Q8N6H7 521 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 Q8N9G6 341 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-212ENST00000496458 RDH11Q8TC12 318 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.92□□□□□ -1.78
SF3B1-212ENST00000496458 FAF2Q96CS3 445 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 VSIG2Q96IQ7 327 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 ZSCAN16Q9H4T2 348 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-212ENST00000496458 DCTPP1Q9H773 170 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 DCLRE1BQ9H816 532 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 CALHM2Q9HA72 323 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 PLSCR3Q9NRY6 295 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 RDH8Q9NYR8 311 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 ADAM22Q9P0K1 906 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 COPS7AQ9UBW8 275 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 EMCNQ9ULC0 261 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 BARX2Q9UMQ3 279 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-212ENST00000496458 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.92□□□□□ -1.78
SF3B1-212ENST00000496458 SLCO1B1Q9Y6L6 691 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 ITSN1Q15811 1721 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 MAPK8IP3Q9UPT6 1336 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 EP400Q96L91 3159 aa3.92□□□□□ -1.78
SF3B1-212ENST00000496458 TDRD6O60522 2096 aaKnown RBP3.91□□□□□ -1.78
SF3B1-212ENST00000496458 SHPRHQ149N8 1683 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 ZNF879B4DU55 563 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 GOLGA8SH3BPF8 625 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 PDXKO00764 312 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 SH2D1BO14796 132 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 ALOX15BO15296 676 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 NVLO15381 856 aaKnown RBP3.91□□□□□ -1.78
SF3B1-212ENST00000496458 ZNF208O43345 1280 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 YEATS4O95619 227 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 SFTPBP07988 381 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 PRKACBP22694 351 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 CPN2P22792 545 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 PRDX2P32119 198 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 LONP1P36776 959 aaKnown RBP3.91□□□□□ -1.78
SF3B1-212ENST00000496458 SLC11A1P49279 550 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 PPT1P50897 306 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 CCL11P51671 97 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 ARHGDIBP52566 201 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 HERV-K104P63124 156 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 MYBPC1Q00872 1141 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 CSTF1Q05048 431 aaKnown RBP3.91□□□□□ -1.78
SF3B1-212ENST00000496458 BST1Q10588 318 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 SELPLGQ14242 412 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 WDR43Q15061 677 aaKnown RBP eCLIP3.91□□□□□ -1.78
SF3B1-212ENST00000496458 KRT31Q15323 416 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 MED1Q15648 1581 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-212ENST00000496458 EXOC3L2Q2M3D2 409 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 NKAIN1Q4KMZ8 207 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 RABGAP1LQ5R372 815 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 CARD17Q5XLA6 110 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 ZNF544Q6NX49 715 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 CBLN3Q6UW01 205 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 ADAMTSL5Q6ZMM2 481 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 ASRGL1Q7L266 308 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 LRRC75A-AS1Q8N1F1 130 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 UBE2J2Q8N2K1 259 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 GPR137CQ8N3F9 429 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 LRRC17Q8N6Y2 441 aa3.91□□□□□ -1.78
SF3B1-212ENST00000496458 OR9K2Q8NGE7 335 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms