RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 A4GALTQ9NPC4 353 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 TMEM45AQ9NWC5 275 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 THUMPD1Q9NXG2 353 aaKnown RBP12.89□□□□□ -0.35
PDAP1-204ENST00000496335 C6orf203Q9P0P8 240 aaPredicted RBP12.89□□□□□ -0.35
PDAP1-204ENST00000496335 OSGIN1Q9UJX0 560 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 ZNF443Q9Y2A4 671 aaPredicted RBP12.89□□□□□ -0.35
PDAP1-204ENST00000496335 CHST2Q9Y4C5 530 aa12.89□□□□□ -0.35
PDAP1-204ENST00000496335 SPIN1Q9Y657 262 aaPredicted RBP12.89□□□□□ -0.35
PDAP1-204ENST00000496335 TRBV5-3A0A0A0MS03 114 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 TMED7-TICAM2A0A0A6YYA0 188 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 SIAH2O43255 324 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 FESP07332 822 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 YES1P07947 543 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 PRG2P13727 222 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 ACAA2P42765 397 aaKnown RBP12.88□□□□□ -0.35
PDAP1-204ENST00000496335 SLC1A3P43003 542 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 IST1P53990 364 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 RASGEF1BQ0VAM2 473 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 TESK1Q15569 626 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 BEND4Q6ZU67 534 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 STK32CQ86UX6 486 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 SLC43A2Q8N370 569 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 STON2Q8WXE9 905 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 ZNF300Q96RE9 604 aaPredicted RBP12.88□□□□□ -0.35
PDAP1-204ENST00000496335 RSPO3Q9BXY4 272 aaPredicted RBP12.88□□□□□ -0.35
PDAP1-204ENST00000496335 RABEP2Q9H5N1 569 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 CCM2LQ9NUG4 571 aaPredicted RBP12.88□□□□□ -0.35
PDAP1-204ENST00000496335 ST6GALNAC2Q9UJ37 374 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 PLEKHA6Q9Y2H5 1048 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 TMED7Q9Y3B3 224 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 ITPR3Q14573 2671 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 MED13LQ71F56 2210 aa12.88□□□□□ -0.35
PDAP1-204ENST00000496335 TMEM72A0PK05 275 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 C5orf58C9J3I9 102 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 FAAHO00519 579 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 CYTIPO60759 359 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 PGM3O95394 542 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 THBS1P07996 1170 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 EDNRAP25101 427 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 HTR3AP46098 478 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 POLR2HP52434 150 aaKnown RBP12.87□□□□□ -0.35
PDAP1-204ENST00000496335 CSNK2A1P68400 391 aaPredicted RBP12.87□□□□□ -0.35
PDAP1-204ENST00000496335 IRX1P78414 480 aaPredicted RBP12.87□□□□□ -0.35
PDAP1-204ENST00000496335 LARS2Q15031 903 aaKnown RBP12.87□□□□□ -0.35
PDAP1-204ENST00000496335 ZNF311Q5JNZ3 666 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 RNF220Q5VTB9 566 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 DLEU7Q6UYE1 221 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 TFAP2EQ6VUC0 442 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.87□□□□□ -0.35
PDAP1-204ENST00000496335 RETREG3Q86VR2 466 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 ZNF440Q8IYI8 595 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 NFKBIDQ8NI38 313 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 SPATA9Q9BWV2 254 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 TMEM120AQ9BXJ8 343 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 ADAM19Q9H013 955 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 PLEKHF2Q9H8W4 249 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 BCO1Q9HAY6 547 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 GP6Q9HCN6 339 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 BCL2L10Q9HD36 194 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 FGFR1OP2Q9NVK5 253 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 ZNF226Q9NYT6 803 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 KLHL9Q9P2J3 617 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.87□□□□□ -0.35
PDAP1-204ENST00000496335 ZNF232Q9UNY5 417 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 TRIM33Q9UPN9 1127 aa12.87□□□□□ -0.35
PDAP1-204ENST00000496335 ZC3H12DA2A288 527 aaKnown RBP12.86□□□□□ -0.35
PDAP1-204ENST00000496335 DEFB108AA8MXU0 73 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 ZNF814B7Z6K7 855 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 FRS3O43559 492 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 RAMP1O60894 148 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 GOSR1O95249 250 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 PMS2P2O95744 297 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 THBDP07204 575 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 ARAFP10398 606 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 UQCRBP14927 111 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 CRYGSP22914 178 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 PPIBP23284 216 aaKnown RBP12.86□□□□□ -0.35
PDAP1-204ENST00000496335 ART1P52961 327 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 OR2B6P58173 313 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 HOXC5Q00444 222 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 TSC22D1Q15714 1073 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 GCNT6Q5T4J0 391 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 PRAMEF8Q5VWM4 474 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 PRAMEF7Q5VXH5 474 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 CGB2Q6NT52 195 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 SERPINA11Q86U17 422 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 MTDHQ86UE4 582 aaKnown RBP12.86□□□□□ -0.35
PDAP1-204ENST00000496335 CXorf67Q86X51 503 aaPredicted RBP12.86□□□□□ -0.35
PDAP1-204ENST00000496335 CADM2Q8N3J6 435 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 BBS10Q8TAM1 723 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 PIK3IP1Q96FE7 263 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 SIKE1Q9BRV8 207 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 CACYBPQ9HB71 228 aaKnown RBP12.86□□□□□ -0.35
PDAP1-204ENST00000496335 LEF1Q9UJU2 399 aaPredicted RBP12.86□□□□□ -0.35
PDAP1-204ENST00000496335 IFT52Q9Y366 437 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 HDGFL3Q9Y3E1 203 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 GMEB1Q9Y692 573 aa12.86□□□□□ -0.35
PDAP1-204ENST00000496335 ZNF208O43345 1280 aa12.85□□□□□ -0.35
PDAP1-204ENST00000496335 GCM2O75603 506 aaPredicted RBP12.85□□□□□ -0.35
PDAP1-204ENST00000496335 IMPDH2P12268 514 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms