RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CHRNA10Q9GZZ6 450 aa10.18□□□□□ -0.78
CMSS1-208ENST00000496116 ERVMER34-1Q9H9K5 563 aa10.18□□□□□ -0.78
CMSS1-208ENST00000496116 MOV10Q9HCE1 1003 aaKnown RBP10.18□□□□□ -0.78
CMSS1-208ENST00000496116 C2orf42Q9NWW7 574 aa10.18□□□□□ -0.78
CMSS1-208ENST00000496116 CHRNA9Q9UGM1 479 aa10.18□□□□□ -0.78
CMSS1-208ENST00000496116 ITGB1BP2Q9UKP3 347 aa10.18□□□□□ -0.78
CMSS1-208ENST00000496116 SIRT4Q9Y6E7 314 aaPredicted RBP10.18□□□□□ -0.78
CMSS1-208ENST00000496116 THADAQ6YHU6 1953 aa10.18□□□□□ -0.78
CMSS1-208ENST00000496116 KNL1Q8NG31 2342 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 CACNA1IQ9P0X4 2223 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 FITM1A5D6W6 292 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 HTR3EA5X5Y0 456 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 FAM25AB3EWG3 89 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 FAM25CB3EWG5 89 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 FAM25GB3EWG6 89 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 GNB5O14775 395 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 GYPBP06028 91 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 IGFBP4P22692 258 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 CD1CP29017 333 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 RPL4P36578 427 aaKnown RBP10.17□□□□□ -0.78
CMSS1-208ENST00000496116 FNTBP49356 437 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 ACTA2P62736 377 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 ACTG2P63267 376 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 ZNF85Q03923 595 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 TDGQ13569 410 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 FHL1Q13642 323 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 RIN1Q13671 783 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 KCNJ8Q15842 424 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 IDNKQ5T6J7 187 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 DPY19L2P2Q6ZN68 376 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 TPRA1Q86W33 373 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 LSRQ86X29 649 aaPredicted RBP10.17□□□□□ -0.78
CMSS1-208ENST00000496116 MS4A15Q8N5U1 240 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 DEFB119Q8N690 84 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 METTL27Q8N6F8 245 aaPredicted RBP10.17□□□□□ -0.78
CMSS1-208ENST00000496116 ZNF615Q8N8J6 731 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 OR4C3Q8NH37 302 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 OR4K13Q8NH42 304 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 ENKURQ8TC29 256 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 CNN2Q99439 309 aaKnown RBP10.17□□□□□ -0.78
CMSS1-208ENST00000496116 SOSTQ9BQB4 213 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 PHF7Q9BWX1 381 aaPredicted RBP10.17□□□□□ -0.78
CMSS1-208ENST00000496116 RNF32Q9H0A6 362 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 C11orf54Q9H0W9 315 aaPredicted RBP10.17□□□□□ -0.78
CMSS1-208ENST00000496116 PPP1R3EQ9H7J1 279 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 ZNF221Q9UK13 617 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 ICAM5Q9UMF0 924 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 ZNF337Q9Y3M9 751 aa10.17□□□□□ -0.78
CMSS1-208ENST00000496116 IGHV5-51A0A0C4DH38 117 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 A0A1W2PR77 199 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 OR2W5A6NFC9 320 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 C17orf105B2RV13 164 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 MBTPS2O43462 519 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 SERPINA3P01011 423 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 HLA-DQB1P01920 261 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 OR2T7P0C7T2 308 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 HIST1H1CP16403 213 aaKnown RBP10.16□□□□□ -0.78
CMSS1-208ENST00000496116 APEX1P27695 318 aaKnown RBP10.16□□□□□ -0.78
CMSS1-208ENST00000496116 INPP1P49441 399 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 GFERP55789 205 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 OR12D2P58182 307 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 PRPS1P60891 318 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 HNRNPKP61978 463 aaKnown RBP eCLIP10.16□□□□□ -0.78
CMSS1-208ENST00000496116 SLC3A1Q07837 685 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 SMAD4Q13485 552 aaKnown RBP10.16□□□□□ -0.78
CMSS1-208ENST00000496116 FAAH2Q6GMR7 532 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 PRR23CQ6ZRP0 262 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 SLITRK4Q8IW52 837 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 SDR16C5Q8N3Y7 309 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 SDR9C7Q8NEX9 313 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 OR2T27Q8NH04 317 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 MRPL48Q96GC5 212 aaKnown RBP10.16□□□□□ -0.78
CMSS1-208ENST00000496116 RAB33BQ9H082 229 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 FBXL4Q9UKA2 621 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 GMEB2Q9UKD1 530 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 IER3IP1Q9Y5U9 82 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 SPTBP11277 2137 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 MEIOCA2RUB1 952 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 TMEM150CB9EJG8 249 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 MCIDASD6RGH6 385 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 TFECO14948 347 aaPredicted RBP10.16□□□□□ -0.78
CMSS1-208ENST00000496116 TRAPPC2P0DI81 140 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 TRAPPC2BP0DI82 140 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 PRKAR1AP10644 381 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 PNMTP11086 282 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 PYCR1P32322 319 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 TALDO1P37837 337 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 ADH7P40394 386 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 EPHA4P54764 986 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 GGTLC2Q14390 218 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 PON3Q15166 354 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 NDUFAF6Q330K2 333 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 KLHL26Q53HC5 615 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 WBP2NLQ6ICG8 309 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 MZT2BQ6NZ67 158 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 PAMR1Q6UXH9 720 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 CEACAM19Q7Z692 300 aa10.16□□□□□ -0.78
CMSS1-208ENST00000496116 LRRC28Q86X40 367 aaPredicted RBP10.16□□□□□ -0.78
CMSS1-208ENST00000496116 C17orf82Q86X59 251 aaPredicted RBP10.16□□□□□ -0.78
CMSS1-208ENST00000496116 RDH10Q8IZV5 341 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms