RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 MAP2K6P52564 334 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 MANFP55145 182 aaKnown RBP8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 E2F2Q14209 437 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 ZNHIT3Q15649 155 aaPredicted RBP8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 LTB4RQ15722 352 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 FAM189A2Q15884 450 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 TSTQ16762 297 aaKnown RBP8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 CT83Q5H943 113 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 ZNF311Q5JNZ3 666 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 ARMC4Q5T2S8 1044 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 CPTPQ5TA50 214 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 DCAF12L2Q5VW00 463 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 FBXW9Q5XUX1 488 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 SAXO2Q658L1 398 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 GRHL2Q6ISB3 625 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 KLHL24Q6TFL4 600 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 DOK3Q7L591 496 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 TRABD2AQ86V40 505 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 EPHX4Q8IUS5 362 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 SYCE1Q8N0S2 351 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 LRRC57Q8N9N7 239 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 ST8SIA4Q92187 359 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 SLC9A6Q92581 669 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 TAF15Q92804 592 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 KLHL29Q96CT2 875 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 VSTM2LQ96N03 204 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 CITED1Q99966 193 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 TMPRSS13Q9BYE2 586 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 PAIP1Q9H074 479 aaKnown RBP8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 HHATLQ9HCP6 504 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 PFDN4Q9NQP4 134 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 MID2Q9UJV3 735 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 TMEM5Q9Y2B1 443 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 AMDHD2Q9Y303 409 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 ZNF780BQ9Y6R6 833 aa8.31□□□□□ -1.08
SMARCAL1-213ENST00000496037 A0A087WUV0 522 aaPredicted RBP8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 IGHV3-15A0A0B4J1V0 119 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 A0A1W2PRB8 838 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 C1orf226A1L170 272 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 CCDC151A5D8V7 595 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 C9JVG2 144 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 LYNX1G3V0Z9 82 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 ZSCAN12O43309 604 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 GUCY1B2O75343 617 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 NME6O75414 186 aaPredicted RBP8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 ERLIN1O75477 346 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 TSPAN9O75954 239 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 MPZL1O95297 269 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 TTC4O95801 387 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 IGHV3-9P01782 118 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 LYNX1P0DP58 116 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 OMGP23515 440 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 PSMA4P25789 261 aaKnown RBP8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 PCGF2P35227 344 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 RFX3P48380 749 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 LOXL3P58215 753 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 MYBPC1Q00872 1141 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 ZNF155Q12901 538 aaPredicted RBP8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 CUL3Q13618 768 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 CRYMQ14894 314 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 ADIPOQQ15848 244 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 ADRM1Q16186 407 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 DECR1Q16698 335 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 PLPPR5Q32ZL2 321 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 BEAN1Q3B7T3 259 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 SLC48A1Q6P1K1 146 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 IKBIPQ70UQ0 350 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 RHOUQ7L0Q8 258 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 GALNT7Q86SF2 657 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 CNGA4Q8IV77 575 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 CNTN4Q8IWV2 1026 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 SAMD14Q8IZD0 417 aaPredicted RBP8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 ZCCHC24Q8N2G6 241 aaKnown RBP8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 CEP70Q8NHQ1 597 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 NPAS1Q99742 590 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 GPA33Q99795 319 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 RSPO3Q9BXY4 272 aaPredicted RBP8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 AKTIPQ9H8T0 292 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 ANKRA2Q9H9E1 313 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 BEX1Q9HBH7 125 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 SMURF1Q9HCE7 757 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 MED4Q9NPJ6 270 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 PPANQ9NQ55 473 aaKnown RBP8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 MED17Q9NVC6 651 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 ASB6Q9NWX5 421 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 GFOD1Q9NXC2 390 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 CD274Q9NZQ7 290 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 SENP1Q9P0U3 644 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 TESQ9UGI8 421 aaKnown RBP8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 MRTO4Q9UKD2 239 aaKnown RBP8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 PSME2Q9UL46 239 aa8.3□□□□□ -1.08
SMARCAL1-213ENST00000496037 hCG_2039718K7EN88 272 aa8.29□□□□□ -1.08
SMARCAL1-213ENST00000496037 GTPBP1O00178 669 aaKnown RBP8.29□□□□□ -1.08
SMARCAL1-213ENST00000496037 H2AFB1P0C5Y9 115 aa8.29□□□□□ -1.08
SMARCAL1-213ENST00000496037 H2AFB2P0C5Z0 115 aa8.29□□□□□ -1.08
SMARCAL1-213ENST00000496037 PGAM1P18669 254 aa8.29□□□□□ -1.08
SMARCAL1-213ENST00000496037 ELK4P28324 431 aa8.29□□□□□ -1.08
SMARCAL1-213ENST00000496037 SHC1P29353 583 aa8.29□□□□□ -1.08
SMARCAL1-213ENST00000496037 NTF4P34130 210 aa8.29□□□□□ -1.08
SMARCAL1-213ENST00000496037 MAGEA6P43360 314 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms