RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 CD1DP15813 335 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 GABRA3P34903 492 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 UBE2NP61088 152 aaKnown RBP12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 ZNF117Q03924 483 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 ZNF154Q13106 437 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 SLC29A2Q14542 456 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 KRT80Q6KB66 452 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 ZC3HC1Q86WB0 502 aaKnown RBP12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 MISPQ8IVT2 679 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 PARP8Q8N3A8 854 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 METTL4Q8N3J2 472 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 UBTD2Q8WUN7 234 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 ZDHHC16Q969W1 377 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 SYT3Q9BQG1 590 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 OCSTAMPQ9BR26 566 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 LEF1Q9UJU2 399 aaPredicted RBP12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 RNF11Q9Y3C5 154 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 WIPI2Q9Y4P8 454 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 ANGPTL3Q9Y5C1 460 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 STARD9Q9P2P6 4700 aa12.35□□□□□ -0.43
CHMP2B-205ENST00000494980 FRAS1Q86XX4 4008 aa12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 IGHV2OR16-5A0A0B4J2B6 119 aa12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 OIP5O43482 229 aa12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 PRKCAP17252 672 aa12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 EVX1P49640 407 aa12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 DBPQ10586 325 aaPredicted RBP12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 DAG1Q14118 895 aa12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 C3orf36Q3SXR2 165 aa12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 DEFB121Q5J5C9 76 aa12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 RNASEH2BQ5TBB1 312 aaKnown RBP12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 FOXB2Q5VYV0 432 aa12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 SLC47A1Q96FL8 570 aa12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 MARS2Q96GW9 593 aaKnown RBP12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 GAL3ST1Q99999 423 aa12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 LMF2Q9BU23 707 aaKnown RBP12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 MRI1Q9BV20 369 aa12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 C3orf14Q9HBI5 128 aa12.34□□□□□ -0.43
CHMP2B-205ENST00000494980 CXorf49A8MYA2 514 aaPredicted RBP12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 SUPT3HB4E1H0 165 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 SULT2B1O00204 365 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 NR5A2O00482 541 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 SUPT3HO75486 399 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 WISP3O95389 354 aaPredicted RBP12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 PSMG1O95456 288 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 MYZAPP0CAP1 466 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 NAT2P11245 290 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 HPGDP15428 266 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 RNF144AP50876 292 aaPredicted RBP12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 SLC16A1P53985 500 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 CSNK2A1P68400 391 aaPredicted RBP12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 ILF2Q12905 390 aaKnown RBP12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 PPP1R7Q15435 360 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 DEFB112Q30KQ8 113 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 CASC10Q5T4H9 136 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 C3orf33Q6P1S2 294 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 TRMT10BQ6PF06 316 aaKnown RBP12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 TMEM107Q6UX40 140 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 ZAR1Q86SH2 424 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 MTDHQ86UE4 582 aaKnown RBP12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 LRRC8AQ8IWT6 810 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 SAMD14Q8IZD0 417 aaPredicted RBP12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 ACTRT1Q8TDG2 376 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 ZNF524Q96C55 264 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 TRIM44Q96DX7 344 aaPredicted RBP12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 RBMXL1Q96E39 390 aaKnown RBP12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 RBBP8Q99708 897 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 POPDC3Q9HBV1 291 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 GIMAP4Q9NUV9 329 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 NUDT4Q9NZJ9 180 aa12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 C19orf53Q9UNZ5 99 aaPredicted RBP12.33□□□□□ -0.44
CHMP2B-205ENST00000494980 A0A087WV62 115 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 TRIM49D1C9J1S8 452 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 SCDO00767 359 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 UGDHO60701 494 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 SKAP2O75563 359 aaPredicted RBP12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 FOXH1O75593 365 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 IGKV3-15P01624 115 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 MAGEB1P43366 347 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 GALNT1Q10472 559 aaPredicted RBP12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 KLHL22Q53GT1 634 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 FAM205BPQ63HN1 556 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 CBLN3Q6UW01 205 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 ZNF620Q6ZNG0 422 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 TMPPEQ6ZT21 453 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 OR52E2Q8NGJ4 325 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 PIGXQ8TBF5 258 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 ST7LQ8TDW4 575 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 BOD1Q96IK1 185 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 MS4A14Q96JA4 679 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 ZNF385DQ9H6B1 395 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 NOX3Q9HBY0 568 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 SIRT3Q9NTG7 399 aaPredicted RBP12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 UBAP1Q9NZ09 502 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 MYEF2Q9P2K5 600 aaKnown RBP12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 PPP2R2CQ9Y2T4 447 aa12.32□□□□□ -0.44
CHMP2B-205ENST00000494980 ARPC4-TTLL3A0A0A6YYG9 625 aa12.31□□□□□ -0.44
CHMP2B-205ENST00000494980 CLDN25C9JDP6 229 aa12.31□□□□□ -0.44
CHMP2B-205ENST00000494980 UBXN8O00124 270 aa12.31□□□□□ -0.44
CHMP2B-205ENST00000494980 UPK1AO00322 258 aa12.31□□□□□ -0.44
CHMP2B-205ENST00000494980 DNALI1O14645 258 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms