RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 YIF1BQ5BJH7 314 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 PIGGQ5H8A4 983 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 BEND6Q5SZJ8 279 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 SEL1L2Q5TEA6 688 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 LYPLAL1Q5VWZ2 237 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 LIPJQ5W064 366 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 FUT10Q6P4F1 479 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 CWC27Q6UX04 472 aaKnown RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 TMPRSS11AQ6ZMR5 421 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 SHFQ7M4L6 423 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 HDDC2Q7Z4H3 204 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 ARHGAP22Q7Z5H3 698 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 DHDDSQ86SQ9 333 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF546Q86UE3 836 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 RANBP3LQ86VV4 465 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 GPBP1Q86WP2 473 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF677Q86XU0 584 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 CRLF3Q8IUI8 442 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 ENTHD1Q8IYW4 607 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF34Q8IZ26 560 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 SYS1Q8N2H4 156 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 PARP8Q8N3A8 854 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 SPATA6LQ8N4H0 392 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 MARVELD2Q8N4S9 558 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 FAM89BQ8N5H3 189 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 GCSAMQ8N6F7 178 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 TMEM99Q8N816 258 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 Q8N9G6 341 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 TTC29Q8NA56 475 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 THAP8Q8NA92 274 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 SCCPDHQ8NBX0 429 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 INO80EQ8NBZ0 244 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 RNF149Q8NC42 400 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 MAPK1IP1LQ8NDC0 245 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 NFAM1Q8NET5 270 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 OR5D18Q8NGL1 313 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 OR6M1Q8NGM8 313 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 OR6Q1Q8NGQ2 317 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 OR2L8Q8NGY9 312 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 OR4L1Q8NH43 312 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 OR52I2Q8NH67 350 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 WDR36Q8NI36 951 aaKnown RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 LNX1Q8TBB1 728 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 MRAPQ8TCY5 172 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 HCAR2Q8TDS4 363 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 RNF133Q8WVZ7 376 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 PYDC1Q8WXC3 89 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 TMEM37Q8WXS4 190 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 HSD17B8Q92506 261 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 P3H4Q92791 437 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 TMEM143Q96AN5 459 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 LGALS12Q96DT0 336 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 MTERF3Q96E29 417 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 PELI1Q96FA3 418 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 CELF6Q96J87 481 aaKnown RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 PPP1R36Q96LQ0 422 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 DEFB118Q96PH6 123 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 CSPG4P5Q96PW8 444 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 F2RL3Q96RI0 385 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 MCCC1Q96RQ3 725 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 S1PR3Q99500 378 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 CCDC3Q9BQI4 270 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 BTBD10Q9BSF8 475 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 PAPOLGQ9BWT3 736 aaKnown RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 MAP1LC3CQ9BXW4 147 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 PRRG4Q9BZD6 226 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 LHX5Q9H2C1 402 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 PIGUQ9H490 435 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 ESRP2Q9H6T0 727 aaKnown RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 PPP1R3EQ9H7J1 279 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 Q9H8V8 135 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 POLE4Q9NR33 117 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 ABCB10Q9NRK6 738 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 PHPT1Q9NRX4 125 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 C19orf12Q9NSK7 152 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 STMN3Q9NZ72 180 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 RCC2Q9P258 522 aaKnown RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 MYEF2Q9P2K5 600 aaKnown RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 GNG12Q9UBI6 72 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF282Q9UDV7 671 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 MIOXQ9UGB7 285 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 C3orf18Q9UK00 162 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 IKZF3Q9UKT9 509 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 SPATA2Q9UM82 520 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 POLDIP2Q9Y2S7 368 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 PRG3Q9Y2Y8 225 aaPredicted RBP1.95□□□□□ -2.1
PTPN12-212ENST00000494248 HYOU1Q9Y4L1 999 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 YIPF1Q9Y548 306 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 AUP1Q9Y679 476 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 PRSS21Q9Y6M0 314 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 CPDO75976 1380 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 CCDC7Q96M83 1385 aa1.95□□□□□ -2.1
PTPN12-212ENST00000494248 AQRO60306 1485 aaKnown RBP eCLIP1.94□□□□□ -2.15e-11■□□□□ 9.3
PTPN12-212ENST00000494248 ATP10AO60312 1499 aa1.94□□□□□ -2.1
PTPN12-212ENST00000494248 PTPRCP08575 1304 aa1.94□□□□□ -2.1
PTPN12-212ENST00000494248 USP42Q9H9J4 1324 aaKnown RBP1.94□□□□□ -2.1
PTPN12-212ENST00000494248 PTPRUQ92729 1446 aa1.94□□□□□ -2.1
PTPN12-212ENST00000494248 ADGRL3Q9HAR2 1447 aa1.94□□□□□ -2.1
PTPN12-212ENST00000494248 A0A0J9YVX5 310 aa1.94□□□□□ -2.1
PTPN12-212ENST00000494248 PRSS51A0A1B0GVH4 220 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms