RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-219ENST00000494069 RLIMQ9NVW2 624 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 SLC35A3Q9Y2D2 325 aa7.57□□□□□ -1.2
LRCH3-219ENST00000494069 FLNAP21333 2647 aaKnown RBP7.57□□□□□ -1.2
LRCH3-219ENST00000494069 TMEM72A0PK05 275 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 ZC3H12DA2A288 527 aaKnown RBP7.56□□□□□ -1.2
LRCH3-219ENST00000494069 SLCO1B7G3V0H7 640 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 SULT2B1O00204 365 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 SMPD2O60906 423 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 LYZL6O75951 148 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 IGHV3-9P01782 118 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 IL6P05231 212 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 NR2F1P10589 423 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 IMPDH2P12268 514 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 IDO1P14902 403 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 PPP3CBP16298 524 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 RPS4Y1P22090 263 aaKnown RBP7.56□□□□□ -1.2
LRCH3-219ENST00000494069 IGHV1-2P23083 117 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 OR3A2P47893 321 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 HPCAP84074 193 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 TAB1Q15750 504 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 LINC01559Q495D7 138 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 RPS26P11Q5JNZ5 115 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-219ENST00000494069 Q5PR19 223 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 MRPL2Q5T653 305 aaKnown RBP7.56□□□□□ -1.2
LRCH3-219ENST00000494069 ABLIM2Q6H8Q1 611 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 SLC2A7Q6PXP3 512 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 EPGNQ6UW88 154 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 SEZ6L2Q6UXD5 910 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 LRRC74BQ6ZQY2 392 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 GRINAQ7Z429 371 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 VRK2Q86Y07 508 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 TRIML2Q8N7C3 387 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 STEAP2Q8NFT2 490 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 LILRB1Q8NHL6 650 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-219ENST00000494069 PIWIL2Q8TC59 973 aaKnown RBP7.56□□□□□ -1.2
LRCH3-219ENST00000494069 IGFBPL1Q8WX77 278 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 NEUROG1Q92886 237 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 CCL19Q99731 98 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 TMEM204Q9BSN7 226 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 RSPO3Q9BXY4 272 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-219ENST00000494069 GP6Q9HCN6 339 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 EXOSC3Q9NQT5 275 aaKnown RBP7.56□□□□□ -1.2
LRCH3-219ENST00000494069 KLHL9Q9P2J3 617 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 CHRNA9Q9UGM1 479 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 CHST2Q9Y4C5 530 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 USH1CQ9Y6N9 552 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 ANK3Q12955 4377 aaKnown RBP7.56□□□□□ -1.2
LRCH3-219ENST00000494069 RAI1Q7Z5J4 1906 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-219ENST00000494069 DSCAMO60469 2012 aa7.56□□□□□ -1.2
LRCH3-219ENST00000494069 ARID1AO14497 2285 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 TMED7-TICAM2A0A0A6YYA0 188 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 DPRXA6NFQ7 191 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 ZNF716A6NP11 495 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 KLF11O14901 512 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 UBDO15205 165 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 ERLIN1O75477 346 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 KRT75O95678 551 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 BCHEP06276 602 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 TFPTP0C1Z6 253 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 GKN3PP0CG01 181 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 PRG2P13727 222 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 IL7RP16871 459 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 HOXB4P17483 251 aaPredicted RBP7.55□□□□□ -1.2
LRCH3-219ENST00000494069 FPR1P21462 350 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 IL32P24001 234 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 TACR3P29371 465 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 APOBEC1P41238 236 aaKnown RBP7.55□□□□□ -1.2
LRCH3-219ENST00000494069 CRATP43155 626 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 IDH3AP50213 366 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 POLR2JP52435 117 aaKnown RBP7.55□□□□□ -1.2
LRCH3-219ENST00000494069 FOXG1P55316 489 aaPredicted RBP7.55□□□□□ -1.2
LRCH3-219ENST00000494069 OR2B6P58173 313 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 ITGADQ13349 1161 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 GSTA3Q16772 222 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 TTMPQ5BVD1 217 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 AGBL2Q5U5Z8 902 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 SHEQ5VZ18 495 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 ZNF836Q6ZNA1 936 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 BHLHA15Q7RTS1 189 aaPredicted RBP7.55□□□□□ -1.2
LRCH3-219ENST00000494069 MTDHQ86UE4 582 aaKnown RBP7.55□□□□□ -1.2
LRCH3-219ENST00000494069 P3H2Q8IVL5 708 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 FUNDC1Q8IVP5 155 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 CLIP4Q8N3C7 705 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 GLB1L3Q8NCI6 653 aaPredicted RBP7.55□□□□□ -1.2
LRCH3-219ENST00000494069 SLC38A5Q8WUX1 472 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 WDR60Q8WVS4 1066 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 AKAP1Q92667 903 aaKnown RBP eCLIP7.55□□□□□ -1.2
LRCH3-219ENST00000494069 KISS1RQ969F8 398 aaPredicted RBP7.55□□□□□ -1.2
LRCH3-219ENST00000494069 PIGTQ969N2 578 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 Q96MF0 132 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 PIP5K1AQ99755 562 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 EBF4Q9BQW3 602 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 PAIP1Q9H074 479 aaKnown RBP7.55□□□□□ -1.2
LRCH3-219ENST00000494069 OR10A4Q9H209 315 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 MTHFD2LQ9H903 347 aaPredicted RBP7.55□□□□□ -1.2
LRCH3-219ENST00000494069 TPT1P8Q9HAU6 139 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 ZIM2Q9NZV7 527 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 OSGIN1Q9UJX0 560 aa7.55□□□□□ -1.2
LRCH3-219ENST00000494069 LIPT1Q9Y234 373 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms