RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ETS2P15036 469 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 GPX2P18283 190 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 ENPP1P22413 925 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 KCNJ5P48544 419 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 MAP2K6P52564 334 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 TMEM201Q5SNT2 666 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 CGB2Q6NT52 195 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 DHDDSQ86SQ9 333 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 C10orf111Q8N326 155 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 POLDIP3Q9BY77 421 aaKnown RBP20.17■□□□□ 0.82
SNIP1-203ENST00000493916 IKZF5Q9H5V7 419 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 TMEM38AQ9H6F2 299 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 BCO1Q9HAY6 547 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 KLHL9Q9P2J3 617 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 OSGIN1Q9UJX0 560 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 CHST2Q9Y4C5 530 aa20.17■□□□□ 0.82
SNIP1-203ENST00000493916 CREBBPQ92793 2442 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 TMED7-TICAM2A0A0A6YYA0 188 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 IGHV3-15A0A0B4J1V0 119 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 EVPLLA8MZ36 301 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 C16orf97H3BN30 126 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 SULT2B1O00204 365 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 ZNF208O43345 1280 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 DNPH1O43598 174 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 CYTIPO60759 359 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 PMS2P2O95744 297 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 TFPIP10646 304 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 TACR3P29371 465 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 ACAA2P42765 397 aaKnown RBP20.16■□□□□ 0.82
SNIP1-203ENST00000493916 GUCY1A3Q02108 690 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 RUNDC3AQ59EK9 446 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 ZNF311Q5JNZ3 666 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 ZNF550Q7Z398 422 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 STK32CQ86UX6 486 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 RETREG3Q86VR2 466 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 TUSC5Q8IXB3 177 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 CLIP4Q8N3C7 705 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 SLC35B4Q969S0 331 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 PSD2Q9BQI7 771 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 ADAM19Q9H013 955 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 ING1Q9UK53 422 aaPredicted RBP20.16■□□□□ 0.82
SNIP1-203ENST00000493916 TMED7Q9Y3B3 224 aa20.16■□□□□ 0.82
SNIP1-203ENST00000493916 ATP8B1O43520 1251 aa20.15■□□□□ 0.82
SNIP1-203ENST00000493916 FESP07332 822 aa20.15■□□□□ 0.82
SNIP1-203ENST00000493916 YES1P07947 543 aa20.15■□□□□ 0.82
SNIP1-203ENST00000493916 VIMP08670 466 aaKnown RBP20.15■□□□□ 0.82
SNIP1-203ENST00000493916 GKN3PP0CG01 181 aa20.15■□□□□ 0.82
SNIP1-203ENST00000493916 CDK6Q00534 326 aa20.15■□□□□ 0.82
SNIP1-203ENST00000493916 ABLIM2Q6H8Q1 611 aa20.15■□□□□ 0.82
SNIP1-203ENST00000493916 REEP3Q6NUK4 255 aa20.15■□□□□ 0.82
SNIP1-203ENST00000493916 BEND4Q6ZU67 534 aa20.15■□□□□ 0.82
SNIP1-203ENST00000493916 NFKBIDQ8NI38 313 aa20.15■□□□□ 0.82
SNIP1-203ENST00000493916 ARL5BQ96KC2 179 aa20.15■□□□□ 0.82
SNIP1-203ENST00000493916 C12orf49Q9H741 205 aa20.15■□□□□ 0.82
SNIP1-203ENST00000493916 FANCFQ9NPI8 374 aa20.15■□□□□ 0.82
SNIP1-203ENST00000493916 TMEM72A0PK05 275 aa20.14■□□□□ 0.81
SNIP1-203ENST00000493916 PRKAR1BP31321 381 aa20.14■□□□□ 0.81
SNIP1-203ENST00000493916 ARFIP2P53365 341 aa20.14■□□□□ 0.81
SNIP1-203ENST00000493916 ADRM1Q16186 407 aa20.14■□□□□ 0.81
SNIP1-203ENST00000493916 EXOC3L2Q2M3D2 409 aa20.14■□□□□ 0.81
SNIP1-203ENST00000493916 WBP2NLQ6ICG8 309 aa20.14■□□□□ 0.81
SNIP1-203ENST00000493916 TFAP2EQ6VUC0 442 aa20.14■□□□□ 0.81
SNIP1-203ENST00000493916 MTDHQ86UE4 582 aaKnown RBP20.14■□□□□ 0.81
SNIP1-203ENST00000493916 DDIT4LQ96D03 193 aa20.14■□□□□ 0.81
SNIP1-203ENST00000493916 ZHX1-C8orf76Q96EF9 292 aa20.14■□□□□ 0.81
SNIP1-203ENST00000493916 ANKRD27Q96NW4 1050 aa20.14■□□□□ 0.81
SNIP1-203ENST00000493916 WFIKKN1Q96NZ8 548 aa20.14■□□□□ 0.81
SNIP1-203ENST00000493916 CGREF1Q99674 301 aa20.14■□□□□ 0.81
SNIP1-203ENST00000493916 OR11A1Q9GZK7 315 aa20.14■□□□□ 0.81
SNIP1-203ENST00000493916 TRAPPC4Q9Y296 219 aa20.14■□□□□ 0.81
SNIP1-203ENST00000493916 ZNF724A8MTY0 619 aa20.13■□□□□ 0.81
SNIP1-203ENST00000493916 KLK2P20151 261 aa20.13■□□□□ 0.81
SNIP1-203ENST00000493916 COPZ1P61923 177 aa20.13■□□□□ 0.81
SNIP1-203ENST00000493916 RASGEF1BQ0VAM2 473 aa20.13■□□□□ 0.81
SNIP1-203ENST00000493916 SCARB2Q14108 478 aa20.13■□□□□ 0.81
SNIP1-203ENST00000493916 PDK3Q15120 406 aa20.13■□□□□ 0.81
SNIP1-203ENST00000493916 NUFIP2Q7Z417 695 aaKnown RBP20.13■□□□□ 0.81
SNIP1-203ENST00000493916 SERPINA11Q86U17 422 aa20.13■□□□□ 0.81
SNIP1-203ENST00000493916 CDC20BQ86Y33 519 aa20.13■□□□□ 0.81
SNIP1-203ENST00000493916 KRT73Q86Y46 540 aa20.13■□□□□ 0.81
SNIP1-203ENST00000493916 MED18Q9BUE0 208 aa20.13■□□□□ 0.81
SNIP1-203ENST00000493916 SPATA5L1Q9BVQ7 753 aa20.13■□□□□ 0.81
SNIP1-203ENST00000493916 KLHL28Q9NXS3 571 aa20.13■□□□□ 0.81
SNIP1-203ENST00000493916 TMEM181Q9P2C4 612 aa20.13■□□□□ 0.81
SNIP1-203ENST00000493916 IGKV3D-15A0A087WSY6 115 aa20.12■□□□□ 0.81
SNIP1-203ENST00000493916 CASKO14936 926 aa20.12■□□□□ 0.81
SNIP1-203ENST00000493916 HRGP04196 525 aa20.12■□□□□ 0.81
SNIP1-203ENST00000493916 PRG2P13727 222 aa20.12■□□□□ 0.81
SNIP1-203ENST00000493916 PPP3CBP16298 524 aa20.12■□□□□ 0.81
SNIP1-203ENST00000493916 CCNA2P20248 432 aa20.12■□□□□ 0.81
SNIP1-203ENST00000493916 SLC6A2P23975 617 aa20.12■□□□□ 0.81
SNIP1-203ENST00000493916 NFYCQ13952 458 aa20.12■□□□□ 0.81
SNIP1-203ENST00000493916 DHRS4L2Q6PKH6 230 aa20.12■□□□□ 0.81
SNIP1-203ENST00000493916 STAC2Q6ZMT1 411 aa20.12■□□□□ 0.81
SNIP1-203ENST00000493916 KLHL4Q9C0H6 718 aa20.12■□□□□ 0.81
SNIP1-203ENST00000493916 OR10A4Q9H209 315 aa20.12■□□□□ 0.81
SNIP1-203ENST00000493916 ZNF226Q9NYT6 803 aa20.12■□□□□ 0.81
SNIP1-203ENST00000493916 CRYGSP22914 178 aa20.11■□□□□ 0.81
SNIP1-203ENST00000493916 DNAJA1P31689 397 aaKnown RBP20.11■□□□□ 0.81
SNIP1-203ENST00000493916 MDH1P40925 334 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms