RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 C10orf67Q8IYJ2 551 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 GATSQ8NAP1 163 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 PSD4Q8NDX1 1056 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 OR52E4Q8NGH9 312 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 OR10Q1Q8NGQ4 319 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 OR4C3Q8NH37 302 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 PHOSPHO1Q8TCT1 267 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 STMN2Q93045 179 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 HGDQ93099 445 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 SDCCAG3Q96C92 435 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 ZG16BQ96DA0 208 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 SLC47A1Q96FL8 570 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 SGCZQ96LD1 299 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 SEPHS2Q99611 448 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 UGT2B28Q9BY64 529 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 ENKD1Q9H0I2 346 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 TP63Q9H3D4 680 aaPredicted RBP11.02□□□□□ -0.65
UPF3A-210ENST00000493727 ABCG2Q9UNQ0 655 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 AURKCQ9UQB9 309 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 RRP15Q9Y3B9 282 aaKnown RBP11.02□□□□□ -0.65
UPF3A-210ENST00000493727 DTNAQ9Y4J8 743 aa11.02□□□□□ -0.65
UPF3A-210ENST00000493727 A0A1B0GTH9 108 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 CDC40O60508 579 aaKnown RBP eCLIP11.01□□□□□ -0.65
UPF3A-210ENST00000493727 PRKD3O94806 890 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 ATE1O95260 518 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 P04436 131 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 GPIP06744 558 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 FESP07332 822 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 NGFRP08138 427 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 UBL4AP11441 157 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 CD247P20963 164 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 ENDOUP21128 410 aaKnown RBP11.01□□□□□ -0.65
UPF3A-210ENST00000493727 RPS4Y1P22090 263 aaKnown RBP11.01□□□□□ -0.65
UPF3A-210ENST00000493727 CCR4P51679 360 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 SELENOWP63302 87 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 CHRNB3Q05901 458 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 FGFBP1Q14512 234 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 ZSWIM7Q19AV6 140 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 FAM98BQ52LJ0 330 aaKnown RBP11.01□□□□□ -0.65
UPF3A-210ENST00000493727 IFI44LQ53G44 452 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 CMPK2Q5EBM0 449 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 MRPL2Q5T653 305 aaKnown RBP11.01□□□□□ -0.65
UPF3A-210ENST00000493727 ENPP6Q6UWR7 440 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 NCCRP1Q6ZVX7 275 aaPredicted RBP11.01□□□□□ -0.65
UPF3A-210ENST00000493727 VTCN1Q7Z7D3 282 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 MARCH3Q86UD3 253 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 SLC22A16Q86VW1 577 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 TMCO5AQ8N6Q1 288 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 GEMIN6Q8WXD5 167 aaKnown RBP11.01□□□□□ -0.65
UPF3A-210ENST00000493727 PYURFQ96I23 114 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 NODALQ96S42 347 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 SECISBP2Q96T21 854 aaKnown RBP11.01□□□□□ -0.65
UPF3A-210ENST00000493727 DOHHQ9BU89 302 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 OSBPL11Q9BXB4 747 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 MCCC2Q9HCC0 563 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 KCNE5Q9UJ90 142 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 SLC35A3Q9Y2D2 325 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 SLC9A8Q9Y2E8 581 aa11.01□□□□□ -0.65
UPF3A-210ENST00000493727 NINQ8N4C6 2090 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 A0A1W2PQD3 144 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 TCRBV5S2A0A599 114 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 TCRBV3S1A0A5B6 114 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 CLDN24A6NM45 220 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 ALG1L2C9J202 215 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 NPIPB9F8W1W9 429 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 SYT5O00445 386 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 ADAM10O14672 748 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 CSTAP01040 98 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 C8BP07358 591 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 UBTFL6P0CB48 400 aaPredicted RBP11□□□□□ -0.65
UPF3A-210ENST00000493727 UMPSP11172 480 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 CHRNB4P30926 498 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 KCNJ5P48544 419 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 MASP1P48740 699 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 CRYBA2P53672 197 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 RGS8P57771 180 aaPredicted RBP11□□□□□ -0.65
UPF3A-210ENST00000493727 GPR85P60893 370 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 KCNJ10P78508 379 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 PLGLB1Q02325 96 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 TLE4Q04727 773 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 DUSP7Q16829 419 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 KLHL26Q53HC5 615 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 PRAMEF20Q5VT98 475 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 RNF220Q5VTB9 566 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 SLC22A10Q63ZE4 541 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 BICRALQ6AI39 1079 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 C3P1Q6ZMU1 363 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 MDGA2Q7Z553 956 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 FGD2Q7Z6J4 655 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 MISPQ8IVT2 679 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 CMIPQ8IY22 773 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 GPR32P1Q8NGA4 272 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 VANGL1Q8TAA9 524 aaPredicted RBP11□□□□□ -0.65
UPF3A-210ENST00000493727 RND1Q92730 232 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 SH3YL1Q96HL8 342 aaPredicted RBP11□□□□□ -0.65
UPF3A-210ENST00000493727 SDHAF3Q9NRP4 125 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 SACM1LQ9NTJ5 587 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 CNIH4Q9P003 139 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 SH3GLB1Q9Y371 365 aa11□□□□□ -0.65
UPF3A-210ENST00000493727 FREM3P0C091 2139 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms