RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 TRGV5A0A0B4J1U4 118 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 A0A1B0GVC2 190 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 OR2M5A3KFT3 312 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 A8MVM7 634 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 B4DXG7 233 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 ST8SIA5O15466 376 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 GADD45GO95257 159 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 IGF2P01344 180 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 PEPDP12955 493 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 IFNGR2P38484 337 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 ARHGDIAP52565 204 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 HMGA2P52926 109 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 CDH12P55289 794 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 RAC1P63000 192 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 PMP22Q01453 160 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 SPIBQ01892 262 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 FOXF1Q12946 379 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 LY6DQ14210 128 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 ATP6AP1Q15904 470 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 CMPK2Q5EBM0 449 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 NHSL2Q5HYW2 709 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 RNFT1Q5M7Z0 435 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 WIPI1Q5MNZ9 446 aaPredicted RBP11.24□□□□□ -0.61
SNX17-208ENST00000493711 TTC33Q6PID6 262 aaPredicted RBP11.24□□□□□ -0.61
SNX17-208ENST00000493711 TRILQ7L0X0 811 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 RRM2BQ7LG56 351 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 GDF7Q7Z4P5 450 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 TSEN54Q7Z6J9 526 aaKnown RBP11.24□□□□□ -0.61
SNX17-208ENST00000493711 YRDCQ86U90 279 aaKnown RBP11.24□□□□□ -0.61
SNX17-208ENST00000493711 SIAH3Q8IW03 269 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 RNF113BQ8IZP6 322 aaKnown RBP11.24□□□□□ -0.61
SNX17-208ENST00000493711 RNF217Q8TC41 542 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 STK35Q8TDR2 534 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 FAR1Q8WVX9 515 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 PYDC1Q8WXC3 89 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 KLHL4Q9C0H6 718 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 EXO5Q9H790 373 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 CHRNA9Q9UGM1 479 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 TMED7Q9Y3B3 224 aa11.24□□□□□ -0.61
SNX17-208ENST00000493711 CPAMD8Q8IZJ3 1885 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 MED13Q9UHV7 2174 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 OR14I1A6ND48 311 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 TNFRSF11BO00300 401 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 AQP7O14520 342 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 FFAR1O14842 300 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 PRSS23O95084 383 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 MST1P26927 711 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 RRM2P31350 389 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 YAP1P46937 504 aaKnown RBP11.23□□□□□ -0.61
SNX17-208ENST00000493711 ERFP50548 548 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 GFRA1P56159 465 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 B3GALT5-AS1P59052 145 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 MFSD13AQ14CX5 517 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 SF3B4Q15427 424 aaKnown RBP eCLIP11.23□□□□□ -0.616e-7■■■■□ 24
SNX17-208ENST00000493711 PDSS1Q5T2R2 415 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 ZNF324BQ6AW86 544 aaPredicted RBP11.23□□□□□ -0.61
SNX17-208ENST00000493711 ARHGAP11AQ6P4F7 1023 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 PCSK4Q6UW60 755 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 LINC00114Q6XXX2 140 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 ADGRG3Q86Y34 549 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 CDK20Q8IZL9 346 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 GHDCQ8N2G8 530 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 CISD2Q8N5K1 135 aaKnown RBP11.23□□□□□ -0.61
SNX17-208ENST00000493711 OR6S1Q8NH40 331 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 POC1BQ8TC44 478 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 ACOT11Q8WXI4 607 aaPredicted RBP11.23□□□□□ -0.61
SNX17-208ENST00000493711 SARAFQ96BY9 339 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 NRBF2Q96F24 287 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 CENPNQ96H22 339 aaPredicted RBP11.23□□□□□ -0.61
SNX17-208ENST00000493711 GPR137Q96N19 417 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 POTEKPQ9BYX7 375 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 DEFB127Q9H1M4 99 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 DCLRE1BQ9H816 532 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 CTPS2Q9NRF8 586 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 PAQR5Q9NXK6 330 aaPredicted RBP11.23□□□□□ -0.61
SNX17-208ENST00000493711 RPH3AQ9Y2J0 694 aaPredicted RBP11.23□□□□□ -0.61
SNX17-208ENST00000493711 RRP15Q9Y3B9 282 aaKnown RBP11.23□□□□□ -0.61
SNX17-208ENST00000493711 TESMINQ9Y4I5 508 aa11.23□□□□□ -0.61
SNX17-208ENST00000493711 TTLL8A6PVC2 850 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 NPIPA5E9PKD4 350 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 J3KTA2 159 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 OR2T1O43869 369 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 SEMA7AO75326 666 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 E2F6O75461 281 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 TIPRLO75663 272 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 LYPD3O95274 346 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 MT-ND1P03886 318 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 POU3F2P20265 443 aaPredicted RBP11.22□□□□□ -0.61
SNX17-208ENST00000493711 DNAJA1P31689 397 aaKnown RBP11.22□□□□□ -0.61
SNX17-208ENST00000493711 RIPK1Q13546 671 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 FGD3Q5JSP0 725 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 DCST1Q5T197 706 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 VASNQ6EMK4 673 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 ZNF730Q6ZMV8 503 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 PM20D2Q8IYS1 436 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 LILRA2Q8N149 483 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 SVOPLQ8N434 492 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 MEIOBQ8N635 442 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 PRR7Q8TB68 274 aa11.22□□□□□ -0.61
SNX17-208ENST00000493711 TMEM239Q8WW34 195 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms