RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 EPHA6Q9UF33 1036 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 FBXL17Q9UF56 701 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 TAC3Q9UHF0 121 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 PCYOX1Q9UHG3 505 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 AMACRQ9UHK6 382 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 FBXL4Q9UKA2 621 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 SNX7Q9UNH6 387 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 BTRCQ9Y297 605 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.6□□□□□ -1.99
PTCD3-218ENST00000493430 MAD1L1Q9Y6D9 718 aa2.6□□□□□ -1.99
PTCD3-218ENST00000493430 ABCA2Q9BZC7 2435 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 PRRC2AP48634 2157 aaKnown RBP2.59□□□□□ -1.99
PTCD3-218ENST00000493430 A0A0G2JMM0 328 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 A0A1W2PPB8 328 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 A0A1W2PRS3 328 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 NCF1BA6NI72 391 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-218ENST00000493430 C17orf51A8MQB3 221 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 NCF1CA8MVU1 366 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-218ENST00000493430 BTNL10A8MVZ5 291 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 KIR3DP1A8MWS1 328 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 TCP11X1B4DZS4 312 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 E9PI62 339 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 G3V3Y1 287 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 H0YGG7 62 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 H3BMM5 538 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 H7C0S8 307 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 SGK494L7N484 410 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 CDC7O00311 574 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 E2F3O00716 465 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 SOCS3O14543 225 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 NDUFS4O43181 175 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 LCMT2O60294 686 aaKnown RBP2.59□□□□□ -1.99
PTCD3-218ENST00000493430 DOK2O60496 412 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 C1orf105O95561 183 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 GUCA1CO95843 209 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 SCGB1D1O95968 90 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 SERPIND1P05546 499 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 GPIP06744 558 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 CCDC175P0C221 793 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 NCF1P14598 390 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-218ENST00000493430 CD9P21926 228 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 CA6P23280 308 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 PSMA4P25789 261 aaKnown RBP2.59□□□□□ -1.99
PTCD3-218ENST00000493430 PTPN4P29074 926 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 IMPA1P29218 277 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 SSTR1P30872 391 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 RPL21P46778 160 aaKnown RBP2.59□□□□□ -1.99
PTCD3-218ENST00000493430 KCNK10P57789 538 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 HERV-K104P61576 105 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 TBPL1P62380 186 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 PPP2R2BQ00005 443 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 ACVR1Q04771 509 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 CDH17Q12864 832 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 TRA2AQ13595 282 aaKnown RBP eCLIP2.59□□□□□ -1.99
PTCD3-218ENST00000493430 SNTB1Q13884 538 aaKnown RBP2.59□□□□□ -1.99
PTCD3-218ENST00000493430 TSTQ16762 297 aaKnown RBP2.59□□□□□ -1.99
PTCD3-218ENST00000493430 PARP6Q2NL67 630 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 PDPK2PQ6A1A2 396 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 PTRHD1Q6GMV3 140 aaKnown RBP2.59□□□□□ -1.99
PTCD3-218ENST00000493430 LRRC8BQ6P9F7 803 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 FIGLAQ6QHK4 219 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 AFTPHQ6ULP2 937 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 VN1R4Q7Z5H5 301 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 ADCK2Q7Z695 626 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 VSIG1Q86XK7 387 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 LRRC49Q8IUZ0 686 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 C11orf53Q8IXP5 236 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 CPSF7Q8N684 471 aaKnown RBP2.59□□□□□ -1.99
PTCD3-218ENST00000493430 UBL4BQ8N7F7 174 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 ZNF321PQ8N8H1 164 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 OR2L3Q8NG85 312 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 OR6C4Q8NGE1 309 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 OR2A1Q8NGT9 310 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 OR9A4Q8NGU2 314 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 OR4L1Q8NH43 312 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 CD200R1Q8TD46 325 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 SLCO2A1Q92959 643 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 MAGOHBQ96A72 148 aaKnown RBP2.59□□□□□ -1.99
PTCD3-218ENST00000493430 KIAA1143Q96AT1 154 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-218ENST00000493430 TMEM159Q96B96 161 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 MTERF3Q96E29 417 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 LINC00615Q96LM1 132 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-218ENST00000493430 DACH2Q96NX9 599 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 SERPINB12Q96P63 405 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 OR4K3Q96R72 315 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 DDOQ99489 341 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 NPAS2Q99743 824 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 DPH7Q9BTV6 452 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 CENPOQ9BU64 300 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 ABHD6Q9BV23 337 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 SLC25A23Q9BV35 468 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 SLC7A5P2Q9GIP4 190 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 ING2Q9H160 280 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 RHBGQ9H310 441 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 TRABDQ9H4I3 376 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 GRPEL1Q9HAV7 217 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 ZNF160Q9HCG1 818 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 HHATLQ9HCP6 504 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 KRT84Q9NSB2 600 aa2.59□□□□□ -1.99
PTCD3-218ENST00000493430 C20orf96Q9NUD7 363 aaPredicted RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms