RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 EMC3Q9P0I2 261 aa7.33□□□□□ -1.24
LSM2-213ENST00000491421 AP3D1O14617 1153 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 UBDO15205 165 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 CLOCKO15516 846 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 ADAM11O75078 769 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 LYZL6O75951 148 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 ANP32DO95626 131 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 PMS2P2O95744 297 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 DBIP07108 87 aaKnown RBP7.32□□□□□ -1.24
LSM2-213ENST00000491421 UQCRBP14927 111 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 IL7RP16871 459 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 CCNA2P20248 432 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 EDNRAP25101 427 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 FKBP2P26885 142 aaKnown RBP7.32□□□□□ -1.24
LSM2-213ENST00000491421 CRATP43155 626 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 MAGEA8P43361 318 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 HTR3AP46098 478 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 PTH2RP49190 550 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 CLK1P49759 484 aaKnown RBP7.32□□□□□ -1.24
LSM2-213ENST00000491421 PLAURQ03405 335 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 STK11Q15831 433 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 GSTA3Q16772 222 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 SLC9B1Q4ZJI4 515 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 PRSS57Q6UWY2 283 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 LRRC74BQ6ZQY2 392 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 BHLHA15Q7RTS1 189 aaPredicted RBP7.32□□□□□ -1.24
LSM2-213ENST00000491421 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.32□□□□□ -1.24
LSM2-213ENST00000491421 MAVSQ7Z434 540 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 ADGRG3Q86Y34 549 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 ZNF611Q8N823 705 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 PIGXQ8TBF5 258 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 WDR60Q8WVS4 1066 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 AKAP1Q92667 903 aaKnown RBP eCLIP7.32□□□□□ -1.24
LSM2-213ENST00000491421 ZNF75CPQ92670 426 aaPredicted RBP7.32□□□□□ -1.24
LSM2-213ENST00000491421 PMM1Q92871 262 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 TLCD1Q96CP7 247 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 DNAJA3Q96EY1 480 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 MAELQ96JY0 434 aaKnown RBP7.32□□□□□ -1.24
LSM2-213ENST00000491421 ARL5BQ96KC2 179 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 SMR3AQ99954 134 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 GSX2Q9BZM3 304 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 OR11A1Q9GZK7 315 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 ALG2Q9H553 416 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 CXorf56Q9H5V9 222 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 ESRP2Q9H6T0 727 aaKnown RBP7.32□□□□□ -1.24
LSM2-213ENST00000491421 RMND5AQ9H871 391 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 TMBIM4Q9HC24 238 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 SDR39U1Q9NRG7 319 aaPredicted RBP7.32□□□□□ -1.24
LSM2-213ENST00000491421 ZIM2Q9NZV7 527 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 P2RX2Q9UBL9 471 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 PRSS50Q9UI38 385 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 NOSIPQ9Y314 301 aaKnown RBP7.32□□□□□ -1.24
LSM2-213ENST00000491421 HDGFL3Q9Y3E1 203 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 RNF115Q9Y4L5 304 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 PCNX3Q9H6A9 2034 aa7.32□□□□□ -1.24
LSM2-213ENST00000491421 IGKV3D-15A0A087WSY6 115 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 TMED7-TICAM2A0A0A6YYA0 188 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 CFAP73A6NFT4 308 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 ZNF716A6NP11 495 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 FAM171A2A8MVW0 826 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 H7C1Q1 480 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 GPR171O14626 319 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 KLF11O14901 512 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 DNPH1O43598 174 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 TMCC2O75069 709 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 CNOT4O95628 575 aaKnown RBP7.31□□□□□ -1.24
LSM2-213ENST00000491421 IGHV3-9P01782 118 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 BCHEP06276 602 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 CD3EP07766 207 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 ZCCHC18P0CG32 403 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 ETFAP13804 333 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 GGT1P19440 569 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 RPS4Y1P22090 263 aaKnown RBP7.31□□□□□ -1.24
LSM2-213ENST00000491421 IGHV1-2P23083 117 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 TACR3P29371 465 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 SLC1A3P43003 542 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 POLR2HP52434 150 aaKnown RBP7.31□□□□□ -1.24
LSM2-213ENST00000491421 POLR2JP52435 117 aaKnown RBP7.31□□□□□ -1.24
LSM2-213ENST00000491421 OR2B6P58173 313 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 EPS8Q12929 822 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 PDK3Q15120 406 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 PPA1Q15181 289 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 LIN52Q52LA3 116 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 C6orf10Q5SRN2 563 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 BEND6Q5SZJ8 279 aaPredicted RBP7.31□□□□□ -1.24
LSM2-213ENST00000491421 NCMAPQ5T1S8 102 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 MRPL2Q5T653 305 aaKnown RBP7.31□□□□□ -1.24
LSM2-213ENST00000491421 CLEC9AQ6UXN8 241 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 MSANTD1Q6ZTZ1 278 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 Q71RC1 249 aaPredicted RBP7.31□□□□□ -1.24
LSM2-213ENST00000491421 ATG4DQ86TL0 474 aaPredicted RBP7.31□□□□□ -1.24
LSM2-213ENST00000491421 PEX5LQ8IYB4 626 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 ZNF440Q8IYI8 595 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 UBE2J2Q8N2K1 259 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 MIER2Q8N344 545 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 PIWIL2Q8TC59 973 aaKnown RBP7.31□□□□□ -1.24
LSM2-213ENST00000491421 IGFBPL1Q8WX77 278 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 APH1AQ96BI3 265 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 DDIT4LQ96D03 193 aa7.31□□□□□ -1.24
LSM2-213ENST00000491421 MUCL1Q96DR8 90 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms