RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CXCR1P25024 350 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 OR3A2P47893 321 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 POLR2JP52435 117 aaKnown RBP14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 OR2B6P58173 313 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 SLC35A1P78382 337 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 LIN52Q52LA3 116 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 PRSS57Q6UWY2 283 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 BHLHA15Q7RTS1 189 aaPredicted RBP14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 NUFIP2Q7Z417 695 aaKnown RBP14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 MAVSQ7Z434 540 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 PSD2Q9BQI7 771 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 COQ10BQ9H8M1 238 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 CTPS2Q9NRF8 586 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 TMEM181Q9P2C4 612 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 KCNE5Q9UJ90 142 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 TRIM33Q9UPN9 1127 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 TRAPPC4Q9Y296 219 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 IFT52Q9Y366 437 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 RNF115Q9Y4L5 304 aa14.73□□□□□ -0.05
PDLIM2-217ENST00000491330 CIB4A0PJX0 185 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 C5orf58C9J3I9 102 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 ZNF208O43345 1280 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 MRPL33O75394 65 aaKnown RBP14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 NID1P14543 1247 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 NCF2P19878 526 aaPredicted RBP14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 CCNA2P20248 432 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 IL12AP29459 219 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 HOXC12P31275 282 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 SLC1A3P43003 542 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 DSTNP60981 165 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 STK11Q15831 433 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 MAPK14Q16539 360 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 SYPL1Q16563 259 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 GABRG1Q8N1C3 465 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 DEPDC4Q8N2C3 294 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 FAM71CQ8NEG0 241 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 PNPT1Q8TCS8 783 aaKnown RBP14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 APH1AQ96BI3 265 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 TRMT61AQ96FX7 289 aaKnown RBP14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 OR52B2Q96RD2 323 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 INPP5KQ9BT40 448 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 CCDC106Q9BWC9 280 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 TAPBPLQ9BX59 468 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 TPT1P8Q9HAU6 139 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 SLCO1B3Q9NPD5 702 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 FAIMQ9NVQ4 179 aa14.72□□□□□ -0.05
PDLIM2-217ENST00000491330 HEATR5AQ86XA9 2040 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 DCHS2Q6V1P9 2916 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 A0A0G2JPF8 293 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 CCT8L1PA6NM43 557 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 HNRNPCL2B2RXH8 293 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 HNRNPCL3B7ZW38 293 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 FAAHO00519 579 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 SMAD9O15198 467 aaKnown RBP14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 CLOCKO15516 846 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 HNRNPCL1O60812 293 aaKnown RBP14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 HNRNPCL4P0DMR1 293 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 GGT1P19440 569 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 PPIBP23284 216 aaKnown RBP14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 IDH3AP50213 366 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 TGFBR3Q03167 851 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 HSP90B2PQ58FF3 399 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 Q5PR19 223 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 METTL21CQ5VZV1 264 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 ZNF611Q8N823 705 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 ANKFN1Q8N957 763 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 OR52P1PQ8NH57 321 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 RADILQ96JH8 1075 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 KLHDC3Q9BQ90 382 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 MED4Q9NPJ6 270 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 UPB1Q9UBR1 384 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 GMEB1Q9Y692 573 aa14.71□□□□□ -0.05
PDLIM2-217ENST00000491330 TACC2O95359 2948 aa14.71□□□□□ -0.06
PDLIM2-217ENST00000491330 MPDZO75970 2070 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 CSMD1Q96PZ7 3565 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 TMED7-TICAM2A0A0A6YYA0 188 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 C9JVG2 144 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 HS3ST1O14792 307 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 KLF4O43474 513 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 ATP8B1O43520 1251 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 INHBBP09529 407 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 TACR3P29371 465 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 AQP5P55064 265 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 FADDQ13158 208 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 TIMM23BQ5SRD1 257 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 FBXW9Q5XUX1 488 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 OR7E24Q6IFN5 339 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 KLHL17Q6TDP4 642 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 DNAJC14Q6Y2X3 702 aaPredicted RBP14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 OLIG3Q7RTU3 272 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 ABHD12BQ7Z5M8 362 aaPredicted RBP14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 WFDC11Q8NEX6 87 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 TSPEARQ8WU66 669 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 CNOT9Q92600 299 aaKnown RBP14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 FBXW5Q969U6 566 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 GTPBP3Q969Y2 492 aaKnown RBP14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 SLC38A1Q9H2H9 487 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 ALG2Q9H553 416 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 ASB6Q9NWX5 421 aa14.7□□□□□ -0.06
PDLIM2-217ENST00000491330 TMED7Q9Y3B3 224 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms