RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 APOL3O95236 402 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 HMGN2P05204 90 aaKnown RBP20.91■□□□□ 0.94
USF3-203ENST00000491165 CCNYL3P0C7X3 344 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 SLC35E2P0CK97 266 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 SDC2P34741 201 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 IFNGR2P38484 337 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 DDOSTP39656 456 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 MC3RP41968 323 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 RPS5P46782 204 aaKnown RBP20.91■□□□□ 0.94
USF3-203ENST00000491165 MGAT2Q10469 447 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 TPBGQ13641 420 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 RTP5Q14D33 572 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 PRICKLE4Q2TBC4 344 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 TRMT12Q53H54 448 aaKnown RBP20.91■□□□□ 0.94
USF3-203ENST00000491165 PDZK1Q5T2W1 519 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 IGF2-ASQ6U949 168 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 GDPD1Q8N9F7 314 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 GNPDA2Q8TDQ7 276 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 TM9SF4Q92544 642 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 SLC9A6Q92581 669 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 UFD1Q92890 307 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 SLC38A2Q96QD8 506 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 SAP130Q9H0E3 1048 aa20.91■□□□□ 0.94
USF3-203ENST00000491165 YARS2Q9Y2Z4 477 aaKnown RBP20.91■□□□□ 0.94
USF3-203ENST00000491165 EXOSC1Q9Y3B2 195 aaKnown RBP20.91■□□□□ 0.94
USF3-203ENST00000491165 A0A087WUU8 490 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 LOC101059948A0A1B0GTJ6 334 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 C9J4A7 227 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 RAD1O60671 282 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 DXOO77932 396 aaKnown RBP20.9■□□□□ 0.94
USF3-203ENST00000491165 STAT5AP42229 794 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 MTNR1AP48039 350 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 TAS2R41P59536 307 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 ZFP69Q49AA0 526 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 MRGPREQ86SM8 312 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 DTX1Q86Y01 620 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 PLPP5Q8NEB5 264 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 OR7G2Q8NG99 324 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 GATAD2BQ8WXI9 593 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 AP3S1Q92572 193 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 SNX18Q96RF0 628 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 GPN3Q9UHW5 284 aaPredicted RBP20.9■□□□□ 0.94
USF3-203ENST00000491165 PTRH2Q9Y3E5 179 aaKnown RBP20.9■□□□□ 0.94
USF3-203ENST00000491165 PCSK5Q92824 1860 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 IGHV3-20A0A0C4DH32 117 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 MEIOCA2RUB1 952 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 TERTO14746 1132 aaKnown RBP20.9■□□□□ 0.94
USF3-203ENST00000491165 TMCC2O75069 709 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 HEXBP07686 556 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 CRTC2Q53ET0 693 aaPredicted RBP20.9■□□□□ 0.94
USF3-203ENST00000491165 ZNF628Q5EBL2 1059 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 PRAMEF8Q5VWM4 474 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 PRAMEF7Q5VXH5 474 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 MEX3DQ86XN8 651 aaKnown RBP20.9■□□□□ 0.94
USF3-203ENST00000491165 ESX1Q8N693 406 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 OR56A1Q8NGH5 318 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 NR4A3Q92570 626 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 NKD1Q969G9 470 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 MOAP1Q96BY2 351 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 ST6GAL2Q96JF0 529 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 CRB3Q9BUF7 120 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 PRRG3Q9BZD7 231 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 MAT2BQ9NZL9 334 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 GPR52Q9Y2T5 361 aa20.9■□□□□ 0.94
USF3-203ENST00000491165 SF3B6Q9Y3B4 125 aaKnown RBP20.9■□□□□ 0.94
USF3-203ENST00000491165 FAM172BPA6NC97 362 aa20.89■□□□□ 0.94
USF3-203ENST00000491165 A8MUA0 341 aa20.89■□□□□ 0.94
USF3-203ENST00000491165 CSF3P09919 207 aa20.89■□□□□ 0.94
USF3-203ENST00000491165 TRAPPC2P0DI81 140 aa20.89■□□□□ 0.94
USF3-203ENST00000491165 TRAPPC2BP0DI82 140 aa20.89■□□□□ 0.94
USF3-203ENST00000491165 ANKK1Q8NFD2 765 aa20.89■□□□□ 0.94
USF3-203ENST00000491165 TP53INP1Q96A56 240 aa20.89■□□□□ 0.94
USF3-203ENST00000491165 KIAA1143Q96AT1 154 aaPredicted RBP20.89■□□□□ 0.94
USF3-203ENST00000491165 C8orf44Q96CB5 159 aa20.89■□□□□ 0.94
USF3-203ENST00000491165 ELP4Q96EB1 424 aa20.89■□□□□ 0.94
USF3-203ENST00000491165 RBM18Q96H35 190 aaKnown RBP20.89■□□□□ 0.94
USF3-203ENST00000491165 QRSL1Q9H0R6 528 aaKnown RBP20.89■□□□□ 0.94
USF3-203ENST00000491165 SLC13A4Q9UKG4 626 aa20.89■□□□□ 0.94
USF3-203ENST00000491165 GSTK1Q9Y2Q3 226 aa20.89■□□□□ 0.94
USF3-203ENST00000491165 MRPS18BQ9Y676 258 aaKnown RBP20.89■□□□□ 0.94
USF3-203ENST00000491165 CCDC182A6NF36 153 aa20.89■□□□□ 0.93
USF3-203ENST00000491165 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.89■□□□□ 0.93
USF3-203ENST00000491165 SYT5O00445 386 aa20.89■□□□□ 0.93
USF3-203ENST00000491165 TFECO14948 347 aaPredicted RBP20.89■□□□□ 0.93
USF3-203ENST00000491165 OR10H2O60403 315 aa20.89■□□□□ 0.93
USF3-203ENST00000491165 NT5EP21589 574 aa20.89■□□□□ 0.93
USF3-203ENST00000491165 GABRA5P31644 462 aa20.89■□□□□ 0.93
USF3-203ENST00000491165 TSPAN31Q12999 210 aa20.89■□□□□ 0.93
USF3-203ENST00000491165 SAMD14Q8IZD0 417 aaPredicted RBP20.89■□□□□ 0.93
USF3-203ENST00000491165 PTPMT1Q8WUK0 201 aaPredicted RBP20.89■□□□□ 0.93
USF3-203ENST00000491165 CTHRC1Q96CG8 243 aa20.89■□□□□ 0.93
USF3-203ENST00000491165 KATNB1Q9BVA0 655 aa20.89■□□□□ 0.93
USF3-203ENST00000491165 MMP28Q9H239 520 aa20.89■□□□□ 0.93
USF3-203ENST00000491165 MARCH7Q9H992 704 aa20.89■□□□□ 0.93
USF3-203ENST00000491165 PNO1Q9NRX1 252 aaKnown RBP20.89■□□□□ 0.93
USF3-203ENST00000491165 HMX3A6NHT5 357 aa20.88■□□□□ 0.93
USF3-203ENST00000491165 KDM4EB2RXH2 506 aaPredicted RBP20.88■□□□□ 0.93
USF3-203ENST00000491165 SEC14L5O43304 696 aa20.88■□□□□ 0.93
USF3-203ENST00000491165 ALOX12BO75342 701 aa20.88■□□□□ 0.93
USF3-203ENST00000491165 IFNA16P05015 189 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms