RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	TGFBR3	Q03167	851 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	ZNF141	Q15928	474 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	CR1L	Q2VPA4	569 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	LSM12	Q3MHD2	195 aa	Known RBP	13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	KANK2	Q63ZY3	851 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	MEX3D	Q86XN8	651 aa	Known RBP	13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	HOMEZ	Q8IX15	550 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	OR52E4	Q8NGH9	312 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	FBXO17	Q96EF6	278 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	SDF2	Q99470	211 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	ATAD3A	Q9NVI7	634 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	CHRNA9	Q9UGM1	479 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	FIS1	Q9Y3D6	152 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	HDGFL3	Q9Y3E1	203 aa		13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
AGAP3-222	ENST00000490839	TENM1	Q9UKZ4	2725 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	ANKRD28	O15084	1053 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	RIPK2	O43353	540 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	URI1	O94763	535 aa	Predicted RBP	13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	C6orf47	O95873	294 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	AK1	P00568	194 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	UBTFL6	P0CB48	400 aa	Predicted RBP	13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	CPA3	P15088	417 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	FKBP2	P26885	142 aa	Known RBP	13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	MAGEA8	P43361	318 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	SLC25A3	Q00325	362 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	RUNX1T1	Q06455	604 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	GPR68	Q15743	365 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	CARTPT	Q16568	116 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	WHAMMP3	Q1A5X7	153 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	MST1L	Q2TV78	715 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	IQCC	Q4KMZ1	466 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	BHLHB9	Q6PI77	547 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	CASP12	Q6UXS9	341 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	EIF3M	Q7L2H7	374 aa	Known RBP	13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	NOA1	Q8NC60	698 aa	Known RBP	13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	ZNF540	Q8NDQ6	660 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	OR5D16	Q8NGK9	328 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	FOXN4	Q96NZ1	517 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	CCDC106	Q9BWC9	280 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	PARPBP	Q9NWS1	579 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	TBK1	Q9UHD2	729 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	KCNE5	Q9UJ90	142 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	SLC9A8	Q9Y2E8	581 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	DNAJC15	Q9Y5T4	150 aa		13.34	□□□□□ -0.27
AGAP3-222	ENST00000490839	MGAM2	Q2M2H8	2515 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	CENPVL1	A0A0U1RR11	272 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	STX11	O75558	287 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	WNT11	O96014	354 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	CLK1	P49759	484 aa	Known RBP	13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	C9orf135	Q5VTT2	229 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	KLHL24	Q6TFL4	600 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	SLC46A3	Q7Z3Q1	461 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	DDIAS	Q8IXT1	998 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	CCDC63	Q8NA47	563 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	FAM71C	Q8NEG0	241 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	OR5AK3P	Q8NH89	298 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	OIT3	Q8WWZ8	545 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	ANP32B	Q92688	251 aa	Known RBP	13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	ARL5B	Q96KC2	179 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	PPP3R2	Q96LZ3	170 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	CTPS2	Q9NRF8	586 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	UPB1	Q9UBR1	384 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839	MOK	Q9UQ07	419 aa		13.33	□□□□□ -0.28
AGAP3-222	ENST00000490839		A0A1W2PPM1	405 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	DUXA	A6NLW8	204 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	WIPF1	O43516	503 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	LYPLA1	O75608	230 aa	Predicted RBP	13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	UGT2B17	O75795	530 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	CRHR1	P34998	444 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	CCT5	P48643	541 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	PRPS1	P60891	318 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	PTGR1	Q14914	329 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	GRINA	Q7Z429	371 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	CCDC103	Q8IW40	242 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	ZNF563	Q8TA94	476 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	TWIST2	Q8WVJ9	160 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	PRPF18	Q99633	342 aa	Known RBP	13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	VRK1	Q99986	396 aa	Predicted RBP	13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	BPESC1	Q9GZL8	116 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	ZNF350	Q9GZX5	532 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	SERHL2	Q9H4I8	314 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	SLC7A10	Q9NS82	523 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	TMEM181	Q9P2C4	612 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	SLC35A3	Q9Y2D2	325 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	FLVCR1	Q9Y5Y0	555 aa		13.32	□□□□□ -0.28
AGAP3-222	ENST00000490839	PIP5K1B	O14986	540 aa		13.31	□□□□□ -0.28
AGAP3-222	ENST00000490839	CFLAR	O15519	480 aa		13.31	□□□□□ -0.28
AGAP3-222	ENST00000490839	FCMR	O60667	390 aa		13.31	□□□□□ -0.28
AGAP3-222	ENST00000490839	EIF1B	O60739	113 aa	Known RBP	13.31	□□□□□ -0.28
AGAP3-222	ENST00000490839	ITGA2	P17301	1181 aa		13.31	□□□□□ -0.28
AGAP3-222	ENST00000490839	MPG	P29372	298 aa		13.31	□□□□□ -0.28
AGAP3-222	ENST00000490839	SOAT1	P35610	550 aa		13.31	□□□□□ -0.28
AGAP3-222	ENST00000490839	PGM1	P36871	562 aa		13.31	□□□□□ -0.28
AGAP3-222	ENST00000490839	SERPINF1	P36955	418 aa		13.31	□□□□□ -0.28
AGAP3-222	ENST00000490839	OR2B6	P58173	313 aa		13.31	□□□□□ -0.28
AGAP3-222	ENST00000490839	RPS26	P62854	115 aa	Known RBP	13.31	□□□□□ -0.28
AGAP3-222	ENST00000490839	H3F3A	P84243	136 aa		13.31	□□□□□ -0.28
AGAP3-222	ENST00000490839	ARHGAP11B	Q3KRB8	267 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms