RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 ZNF525Q8N782 197 aa13.65□□□□□ -0.22
COL2A1-207ENST00000490609 OR52E4Q8NGH9 312 aa13.65□□□□□ -0.22
COL2A1-207ENST00000490609 RAB8BQ92930 207 aa13.65□□□□□ -0.22
COL2A1-207ENST00000490609 MUCL1Q96DR8 90 aa13.65□□□□□ -0.22
COL2A1-207ENST00000490609 HS6ST2Q96MM7 605 aa13.65□□□□□ -0.22
COL2A1-207ENST00000490609 TNFRSF13CQ96RJ3 184 aa13.65□□□□□ -0.22
COL2A1-207ENST00000490609 C1QTNF6Q9BXI9 259 aa13.65□□□□□ -0.22
COL2A1-207ENST00000490609 AMBRA1Q9C0C7 1298 aa13.65□□□□□ -0.22
COL2A1-207ENST00000490609 EML4Q9HC35 981 aaKnown RBP13.65□□□□□ -0.22
COL2A1-207ENST00000490609 CBLN4Q9NTU7 201 aa13.65□□□□□ -0.22
COL2A1-207ENST00000490609 MALT1Q9UDY8 824 aa13.65□□□□□ -0.22
COL2A1-207ENST00000490609 LGALS13Q9UHV8 139 aa13.65□□□□□ -0.22
COL2A1-207ENST00000490609 LY6HO94772 140 aa13.64□□□□□ -0.23
COL2A1-207ENST00000490609 PMS2P2O95744 297 aa13.64□□□□□ -0.23
COL2A1-207ENST00000490609 TP53P04637 393 aaPredicted RBP13.64□□□□□ -0.23
COL2A1-207ENST00000490609 BPGMP07738 259 aa13.64□□□□□ -0.23
COL2A1-207ENST00000490609 OR12D1P0DN82 309 aa13.64□□□□□ -0.23
COL2A1-207ENST00000490609 IMPDH2P12268 514 aa13.64□□□□□ -0.23
COL2A1-207ENST00000490609 PGCP20142 388 aa13.64□□□□□ -0.23
COL2A1-207ENST00000490609 APOBEC1P41238 236 aaKnown RBP13.64□□□□□ -0.23
COL2A1-207ENST00000490609 CHRNEQ04844 493 aa13.64□□□□□ -0.23
COL2A1-207ENST00000490609 LOXL1Q08397 574 aaPredicted RBP13.64□□□□□ -0.23
COL2A1-207ENST00000490609 MST1LQ2TV78 715 aa13.64□□□□□ -0.23
COL2A1-207ENST00000490609 AGAP6Q5VW22 663 aa13.64□□□□□ -0.23
COL2A1-207ENST00000490609 PIAS4Q8N2W9 510 aaPredicted RBP13.64□□□□□ -0.23
COL2A1-207ENST00000490609 OR8J2Q8NGG1 315 aa13.64□□□□□ -0.23
COL2A1-207ENST00000490609 TUBGCP3Q96CW5 907 aa13.64□□□□□ -0.23
COL2A1-207ENST00000490609 RHNO1Q9BSD3 238 aa13.64□□□□□ -0.23
COL2A1-207ENST00000490609 ALG2Q9H553 416 aa13.64□□□□□ -0.23
COL2A1-207ENST00000490609 BARX1Q9HBU1 254 aaPredicted RBP13.64□□□□□ -0.23
COL2A1-207ENST00000490609 CHRNA9Q9UGM1 479 aa13.64□□□□□ -0.23
COL2A1-207ENST00000490609 RNF103-CHMP3A0A140T963 221 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 DUXAA6NLW8 204 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 RNASET2O00584 256 aaKnown RBP13.63□□□□□ -0.23
COL2A1-207ENST00000490609 AP3D1O14617 1153 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 TYROBPO43914 113 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 AK1P00568 194 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 DDX5P17844 614 aaKnown RBP13.63□□□□□ -0.23
COL2A1-207ENST00000490609 SOAT1P35610 550 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 SERPINB5P36952 375 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 CSNK2A1P68400 391 aaPredicted RBP13.63□□□□□ -0.23
COL2A1-207ENST00000490609 VLDLRP98155 873 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 NRF1Q16656 503 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 SAXO2Q658L1 398 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 TNFAIP8L2Q6P589 184 aaPredicted RBP13.63□□□□□ -0.23
COL2A1-207ENST00000490609 EIF3MQ7L2H7 374 aaKnown RBP13.63□□□□□ -0.23
COL2A1-207ENST00000490609 ANKRD46Q86W74 232 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 MUC15Q8N387 334 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 ZIC4Q8N9L1 334 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 C10orf105Q8TEF2 133 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 CNOT9Q92600 299 aaKnown RBP13.63□□□□□ -0.23
COL2A1-207ENST00000490609 APH1AQ96BI3 265 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 RADILQ96JH8 1075 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 SLC35G5Q96KT7 338 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 PRPF18Q99633 342 aaKnown RBP13.63□□□□□ -0.23
COL2A1-207ENST00000490609 AKTIPQ9H8T0 292 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 SERINC1Q9NRX5 453 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 FAIMQ9NVQ4 179 aa13.63□□□□□ -0.23
COL2A1-207ENST00000490609 NOSIPQ9Y314 301 aaKnown RBP13.63□□□□□ -0.23
COL2A1-207ENST00000490609 ZC3H12DA2A288 527 aaKnown RBP13.62□□□□□ -0.23
COL2A1-207ENST00000490609 H7C417 338 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 PHF1O43189 567 aaPredicted RBP13.62□□□□□ -0.23
COL2A1-207ENST00000490609 NUDT17P0C025 328 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 IGHV4-31P0DP07 118 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 PTAFRP25105 342 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 RYKP34925 604 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 NUDT6P53370 316 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 CASP8Q14790 479 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 MAPK11Q15759 364 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 CHRFAM7AQ494W8 412 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 TMEM108Q6UXF1 575 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 HOMEZQ8IX15 550 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 ARIH2OSQ8N7S6 290 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 SLC25A43Q8WUT9 341 aaPredicted RBP13.62□□□□□ -0.23
COL2A1-207ENST00000490609 XAGE5Q8WWM1 108 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 TMEM234Q8WY98 164 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 ROPN1LQ96C74 230 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 TEX37Q96LM6 180 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 MANSC1Q9H8J5 431 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 SLC7A10Q9NS82 523 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 ASB6Q9NWX5 421 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 TAS2R16Q9NYV7 291 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 MGAT4BQ9UQ53 548 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 HDGFL3Q9Y3E1 203 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 FLVCR1Q9Y5Y0 555 aa13.62□□□□□ -0.23
COL2A1-207ENST00000490609 TMEM72A0PK05 275 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 VWC2LB2RUY7 222 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 M0R1B8 84 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 HMGN4O00479 90 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 FAM157CP0CG43 387 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 TFPIP10646 304 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 CCNA2P20248 432 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 KCNJ10P78508 379 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 SLC17A1Q14916 467 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 SWI5Q1ZZU3 235 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 SMU1Q2TAY7 513 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 TSPO2Q5TGU0 170 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 C9orf135Q5VTT2 229 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 BHLHB9Q6PI77 547 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 SLC22A25Q6T423 547 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms