RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 MRGPRX4Q96LA9 322 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 ELAC2Q9BQ52 826 aaKnown RBP9.25□□□□□ -0.93
TTC28-207ENST00000490475 ACTR6Q9GZN1 396 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 TMEM45AQ9NWC5 275 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 SLC25A37Q9NYZ2 338 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 CARD8Q9Y2G2 431 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 DTNAQ9Y4J8 743 aa9.25□□□□□ -0.93
TTC28-207ENST00000490475 RAI1Q7Z5J4 1906 aaPredicted RBP9.25□□□□□ -0.93
TTC28-207ENST00000490475 A0A096LPI6 279 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.24□□□□□ -0.93
TTC28-207ENST00000490475 A0A1W2PP18 115 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 CLIC1O00299 241 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 TNFSF11O14788 317 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 HS3ST1O14792 307 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 SIAH2O43255 324 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 EIF4E2O60573 245 aaKnown RBP9.24□□□□□ -0.93
TTC28-207ENST00000490475 UGT2B17O75795 530 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 PRKD3O94806 890 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 H6PDO95479 791 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 LINGO3P0C6S8 592 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 NQO1P15559 274 aaKnown RBP9.24□□□□□ -0.93
TTC28-207ENST00000490475 HOXB9P17482 250 aaPredicted RBP9.24□□□□□ -0.93
TTC28-207ENST00000490475 FKBP2P26885 142 aaKnown RBP9.24□□□□□ -0.93
TTC28-207ENST00000490475 AGTR1P30556 359 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 IRX1P78414 480 aaPredicted RBP9.24□□□□□ -0.93
TTC28-207ENST00000490475 PPP2R2BQ00005 443 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 ZNF117Q03924 483 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 SELENBP1Q13228 472 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 MAPK11Q15759 364 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 ZNF239Q16600 458 aaKnown RBP9.24□□□□□ -0.93
TTC28-207ENST00000490475 NDUFAF6Q330K2 333 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 GPAT3Q53EU6 434 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 PDZK1Q5T2W1 519 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 AP1ARQ63HQ0 302 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 TYW3Q6IPR3 259 aaKnown RBP9.24□□□□□ -0.93
TTC28-207ENST00000490475 ADAM5Q6NVV9 412 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 CBLN3Q6UW01 205 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 DLEU7Q6UYE1 221 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 FRRS1Q6ZNA5 592 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 ZNF704Q6ZNC4 412 aaPredicted RBP9.24□□□□□ -0.93
TTC28-207ENST00000490475 ASRGL1Q7L266 308 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 RETREG3Q86VR2 466 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 KRTAP1-3Q8IUG1 177 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 ZNF614Q8N883 585 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 RNF128Q8TEB7 428 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 HSD17B8Q92506 261 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 GTPBP3Q969Y2 492 aaKnown RBP9.24□□□□□ -0.93
TTC28-207ENST00000490475 TRMT61AQ96FX7 289 aaKnown RBP9.24□□□□□ -0.93
TTC28-207ENST00000490475 Q96MF0 132 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 TRNT1Q96Q11 434 aaKnown RBP9.24□□□□□ -0.93
TTC28-207ENST00000490475 NPAS1Q99742 590 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 NMUR2Q9GZQ4 415 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 ZNF350Q9GZX5 532 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 SAP130Q9H0E3 1048 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 QRSL1Q9H0R6 528 aaKnown RBP9.24□□□□□ -0.93
TTC28-207ENST00000490475 ESRP2Q9H6T0 727 aaKnown RBP9.24□□□□□ -0.93
TTC28-207ENST00000490475 SAR1AQ9NR31 198 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 VAPAQ9P0L0 249 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 KLHL9Q9P2J3 617 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 KLHL13Q9P2N7 655 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 WDR45Q9Y484 360 aa9.24□□□□□ -0.93
TTC28-207ENST00000490475 JMJD1CQ15652 2540 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 A0A0J9YW62 118 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 SERINC4A6NH21 518 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 KLF4O43474 513 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 CNOT4O95628 575 aaKnown RBP9.23□□□□□ -0.93
TTC28-207ENST00000490475 OPN1LWP04000 364 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 YES1P07947 543 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 CHRM4P08173 479 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 NUDT7P0C024 238 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 TFPTP0C1Z6 253 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 NR2F1P10589 423 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 IL32P24001 234 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 SLC7A1P30825 629 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 SLC6A8P48029 635 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 PTH2RP49190 550 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 RAC3P60763 192 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 CBFBQ13951 182 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 RGNQ15493 299 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 TOMM34Q15785 309 aaPredicted RBP9.23□□□□□ -0.93
TTC28-207ENST00000490475 ZNF141Q15928 474 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 LRIF1Q5T3J3 769 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 C3orf33Q6P1S2 294 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 FCRLAQ7L513 359 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 C10orf111Q8N326 155 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 OR5W2Q8NH69 310 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 SLC38A5Q8WUX1 472 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 C10orf82Q8WW14 230 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 TMEM234Q8WY98 164 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 ZNF524Q96C55 264 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 ARSGQ96EG1 525 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 PERPQ96FX8 193 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 PLPPR2Q96GM1 343 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 TMEM204Q9BSN7 226 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 SLC38A1Q9H2H9 487 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 MTHFD2LQ9H903 347 aaPredicted RBP9.23□□□□□ -0.93
TTC28-207ENST00000490475 SERINC1Q9NRX5 453 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 ZNF701Q9NV72 531 aaPredicted RBP9.23□□□□□ -0.93
TTC28-207ENST00000490475 ICAM5Q9UMF0 924 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 LIPT1Q9Y234 373 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms