RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 CDH11P55287 796 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 TNK1Q13470 666 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 PDK3Q15120 406 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 MAPK14Q16539 360 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 FAM174BQ3ZCQ3 159 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 SPANXN4Q5MJ08 99 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 TIMM23BQ5SRD1 257 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 SAXO2Q658L1 398 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 ABLIM2Q6H8Q1 611 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 WDR93Q6P2C0 686 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.95□□□□□ -0.82
DUBR-204ENST00000490441 GRINAQ7Z429 371 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 MTDHQ86UE4 582 aaKnown RBP9.95□□□□□ -0.82
DUBR-204ENST00000490441 P2RY8Q86VZ1 359 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 LRRC34Q8IZ02 419 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 ARFGAP2Q8N6H7 521 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 TRIML2Q8N7C3 387 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 FAM71CQ8NEG0 241 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 LILRB1Q8NHL6 650 aaPredicted RBP9.95□□□□□ -0.82
DUBR-204ENST00000490441 PIGXQ8TBF5 258 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 NEUROG1Q92886 237 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 APH1AQ96BI3 265 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 NEURL3Q96EH8 262 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 HS6ST2Q96MM7 605 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 NUF2Q9BZD4 464 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 SSU72Q9NP77 194 aaKnown RBP9.95□□□□□ -0.82
DUBR-204ENST00000490441 KCNK9Q9NPC2 374 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 CTPS2Q9NRF8 586 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 LIPT1Q9Y234 373 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 NOSIPQ9Y314 301 aaKnown RBP9.95□□□□□ -0.82
DUBR-204ENST00000490441 HDGFL3Q9Y3E1 203 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 MAGED1Q9Y5V3 778 aaPredicted RBP9.95□□□□□ -0.82
DUBR-204ENST00000490441 ALPK2Q86TB3 2170 aa9.95□□□□□ -0.82
DUBR-204ENST00000490441 ATRQ13535 2644 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 IGKV3D-15A0A087WSY6 115 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 DPRXA6NFQ7 191 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 CCT8L1PA6NM43 557 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 OVOL3O00110 214 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 DNPH1O43598 174 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 SCN2BO60939 215 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 RAD51DO75771 328 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 PMS2P2O95744 297 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 DANCRP0C864 163 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 UQCRBP14927 111 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 COX5AP20674 150 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 BGNP21810 368 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 HTR3AP46098 478 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 CLK1P49759 484 aaKnown RBP9.94□□□□□ -0.82
DUBR-204ENST00000490441 KCNJ10P78508 379 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 DMTNQ08495 405 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 STX3Q13277 289 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 GNA13Q14344 377 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 CASP8Q14790 479 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 FBXW9Q5XUX1 488 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 KLHL17Q6TDP4 642 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 FRRS1Q6ZNA5 592 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 ATG4DQ86TL0 474 aaPredicted RBP9.94□□□□□ -0.82
DUBR-204ENST00000490441 MREGQ8N565 214 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 ZNF75CPQ92670 426 aaPredicted RBP9.94□□□□□ -0.82
DUBR-204ENST00000490441 RADILQ96JH8 1075 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 PANX1Q96RD7 426 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 PAIP2Q9BPZ3 127 aaKnown RBP9.94□□□□□ -0.82
DUBR-204ENST00000490441 CCDC106Q9BWC9 280 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 TRIM2Q9C040 744 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 SAP130Q9H0E3 1048 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 BARX1Q9HBU1 254 aaPredicted RBP9.94□□□□□ -0.82
DUBR-204ENST00000490441 EXOSC3Q9NQT5 275 aaKnown RBP9.94□□□□□ -0.82
DUBR-204ENST00000490441 ASB6Q9NWX5 421 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 CISD1Q9NZ45 108 aaKnown RBP9.94□□□□□ -0.82
DUBR-204ENST00000490441 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.94□□□□□ -0.82
DUBR-204ENST00000490441 POU2F3Q9UKI9 436 aa9.94□□□□□ -0.82
DUBR-204ENST00000490441 V9GYY5 206 aaPredicted RBP9.94□□□□□ -0.82
DUBR-204ENST00000490441 DNHD1Q96M86 4753 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 OR5H1A6NKK0 313 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 ABCD4O14678 606 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 MRPL33O75394 65 aaKnown RBP9.93□□□□□ -0.82
DUBR-204ENST00000490441 IGHV3-9P01782 118 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 TP53P04637 393 aaPredicted RBP9.93□□□□□ -0.82
DUBR-204ENST00000490441 CCNA2P20248 432 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 EDNRAP25101 427 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 MAGEA8P43361 318 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 IDH2P48735 452 aaKnown RBP9.93□□□□□ -0.82
DUBR-204ENST00000490441 NME5P56597 212 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 OR2B6P58173 313 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 PHC1P78364 1004 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 TXNL4AP83876 142 aaKnown RBP9.93□□□□□ -0.82
DUBR-204ENST00000490441 CHRNEQ04844 493 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 LRRC74AQ0VAA2 488 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 FUT5Q11128 374 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 PGGHGQ32M88 737 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 CEP85LQ5SZL2 805 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 AGAP6Q5VW22 663 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 SEZ6L2Q6UXD5 910 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 TMEM108Q6UXF1 575 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 DNAJC14Q6Y2X3 702 aaPredicted RBP9.93□□□□□ -0.82
DUBR-204ENST00000490441 HMGN2P46Q86SG4 172 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 RNF130Q86XS8 419 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 CMIPQ8IY22 773 aa9.93□□□□□ -0.82
DUBR-204ENST00000490441 ZNF433Q8N7K0 673 aaPredicted RBP9.93□□□□□ -0.82
DUBR-204ENST00000490441 DDIT4LQ96D03 193 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms