RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 LRRC43Q8N309 656 aa3.83□□□□□ -1.8
VPS26A-206ENST00000489794 OR51G2Q8NGK0 314 aa3.83□□□□□ -1.8
VPS26A-206ENST00000489794 CTNNBL1Q8WYA6 563 aaPredicted RBP3.83□□□□□ -1.8
VPS26A-206ENST00000489794 FAM3CQ92520 227 aa3.83□□□□□ -1.8
VPS26A-206ENST00000489794 TUBGCP3Q96CW5 907 aa3.83□□□□□ -1.8
VPS26A-206ENST00000489794 TMEM101Q96IK0 257 aa3.83□□□□□ -1.8
VPS26A-206ENST00000489794 ARHGDIGQ99819 225 aa3.83□□□□□ -1.8
VPS26A-206ENST00000489794 ZSCAN5AQ9BUG6 496 aa3.83□□□□□ -1.8
VPS26A-206ENST00000489794 RNF126Q9BV68 326 aa3.83□□□□□ -1.8
VPS26A-206ENST00000489794 MAGT1Q9H0U3 335 aa3.83□□□□□ -1.8
VPS26A-206ENST00000489794 NARFLQ9H6Q4 476 aa3.83□□□□□ -1.8
VPS26A-206ENST00000489794 SMPD3Q9NY59 655 aaPredicted RBP3.83□□□□□ -1.8
VPS26A-206ENST00000489794 CHRNA9Q9UGM1 479 aa3.83□□□□□ -1.8
VPS26A-206ENST00000489794 RPH3ALQ9UNE2 315 aa3.83□□□□□ -1.8
VPS26A-206ENST00000489794 ASB3Q9Y575 518 aa3.83□□□□□ -1.8
VPS26A-206ENST00000489794 CA1P00915 261 aaPredicted RBP3.82□□□□□ -1.8
VPS26A-206ENST00000489794 DRD5P21918 477 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 ANXA13P27216 316 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 OTX2P32243 289 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 PPT1P50897 306 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 KRTAP12-2P59991 146 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 UBE2HP62256 183 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 IL24Q13007 206 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 ARFRP1Q13795 201 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 SELPLGQ14242 412 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 MXD4Q14582 209 aaPredicted RBP3.82□□□□□ -1.8
VPS26A-206ENST00000489794 HERPUD1Q15011 391 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 CCDC152Q4G0S7 254 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 ZCCHC7Q8N3Z6 543 aaKnown RBP3.82□□□□□ -1.8
VPS26A-206ENST00000489794 SENP8Q96LD8 212 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 NIPSNAP3BQ9BS92 247 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 ALG12Q9BV10 488 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 EDEM2Q9BV94 578 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 POLR1EQ9GZS1 481 aaKnown RBP3.82□□□□□ -1.8
VPS26A-206ENST00000489794 RHBGQ9H310 441 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 VPS37BQ9H9H4 285 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 PHF11Q9UIL8 331 aa3.82□□□□□ -1.8
VPS26A-206ENST00000489794 MRPS7Q9Y2R9 242 aaKnown RBP3.82□□□□□ -1.8
VPS26A-206ENST00000489794 A0A0J9YXY3 114 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 MBLAC1A4D2B0 266 aaPredicted RBP3.81□□□□□ -1.8
VPS26A-206ENST00000489794 BTN3A3O00478 584 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 XPO1O14980 1071 aaKnown RBP3.81□□□□□ -1.8
VPS26A-206ENST00000489794 MAGEB3O15480 346 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 RS1O15537 224 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 HCRTR1O43613 425 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 NEBLO76041 1014 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 TM7SF2O76062 418 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 ATP6V1C1P21283 382 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 GDI1P31150 447 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 FGF9P31371 208 aaPredicted RBP3.81□□□□□ -1.8
VPS26A-206ENST00000489794 TAGLN2P37802 199 aaKnown RBP3.81□□□□□ -1.8
VPS26A-206ENST00000489794 SPIBQ01892 262 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 PDK4Q16654 411 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 ATL3Q6DD88 541 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 KRTAP11-1Q8IUC1 163 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 SLC34A3Q8N130 599 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 CLEC4FQ8N1N0 589 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 OR2T3Q8NH03 318 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 PAQR8Q8TEZ7 354 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 RNF138Q8WVD3 245 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 RLN3Q8WXF3 142 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 OSTF1Q92882 214 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 CCNL2Q96S94 520 aaPredicted RBP3.81□□□□□ -1.8
VPS26A-206ENST00000489794 PLEKHF1Q96S99 279 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 HIST1H4GQ99525 98 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 SELENOIQ9C0D9 397 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 MEAF6Q9HAF1 191 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 PLGRKTQ9HBL7 147 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 RNF14Q9UBS8 474 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 PTBP2Q9UKA9 531 aaKnown RBP3.81□□□□□ -1.8
VPS26A-206ENST00000489794 ERVW-1Q9UQF0 538 aa3.81□□□□□ -1.8
VPS26A-206ENST00000489794 CLSPNQ9HAW4 1339 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 SYNRGQ9UMZ2 1314 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 C15orf38-AP3S2A0A0A6YYH1 394 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 CXCL11O14625 94 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 TAPBPO15533 448 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 KLHL41O60662 606 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 CA8P35219 290 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 DAP3P51398 398 aaKnown RBP3.8□□□□□ -1.8
VPS26A-206ENST00000489794 CAV2P51636 162 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 CBX1P83916 185 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 BEX3Q00994 111 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 CNTN2Q02246 1040 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 CUL1Q13616 776 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 GANABQ14697 944 aaKnown RBP3.8□□□□□ -1.8
VPS26A-206ENST00000489794 TRIM16LQ309B1 348 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 KCTD21Q4G0X4 260 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 BEND3Q5T5X7 828 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 C11orf71Q6IPW1 123 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 ACOT7LQ6ZUV0 252 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 FAM220AQ7Z4H9 259 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 CCDC50Q8IVM0 306 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 ZNF679Q8IYX0 411 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 EIF1ADQ8N9N8 165 aaKnown RBP3.8□□□□□ -1.8
VPS26A-206ENST00000489794 OR52I1Q8NGK6 324 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 OR5L2Q8NGL0 311 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 HTR3CQ8WXA8 447 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 PGLYRP4Q96LB8 373 aa3.8□□□□□ -1.8
VPS26A-206ENST00000489794 GAL3ST1Q99999 423 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms