RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 MTNR1AP48039 350 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 FOXA1P55317 472 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 TPD52P55327 224 aaPredicted RBP6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 RPS15AP62244 130 aaKnown RBP6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 EMX2Q04743 252 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 TRAP1Q12931 704 aaKnown RBP6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 RBMY1FQ15415 496 aaKnown RBP6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 DEFB134Q4QY38 66 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 XKR7Q5GH72 579 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 ARMCX4Q5H9R4 360 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 TCTEX1D4Q5JR98 221 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 LETMD1Q6P1Q0 360 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 RNF165Q6ZSG1 346 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 SSX8Q7RTT4 187 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 ADCK2Q7Z695 626 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 DHDDSQ86SQ9 333 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 SPATA24Q86W54 205 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 OR4N5Q8IXE1 308 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 C9orf40Q8IXQ3 194 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 ZNF740Q8NDX6 193 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 HIPK4Q8NE63 616 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 OR4S1Q8NGB4 309 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 OR4F6Q8NGB9 312 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 OR14A16Q8NHC5 309 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 SPPL2AQ8TCT8 520 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 SLC2A12Q8TD20 617 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 UBASH3BQ8TF42 649 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 NEU4Q8WWR8 484 aaPredicted RBP6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 PYDC1Q8WXC3 89 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 ESAMQ96AP7 390 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 ASB9Q96DX5 294 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 SPDL1Q96EA4 605 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 SLC47A1Q96FL8 570 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 SFXN2Q96NB2 322 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 RCHY1Q96PM5 261 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 ZNF184Q99676 751 aaPredicted RBP6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 CHIAQ9BZP6 476 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 BRINP2Q9C0B6 783 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 VCXQ9H320 206 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 MUC13Q9H3R2 512 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 TOR3AQ9H497 397 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 FOLH1BQ9HBA9 442 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 MYNNQ9NPC7 610 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 SLC6A13Q9NSD5 602 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 FAM120CQ9NX05 1096 aaKnown RBP6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 SPATA7Q9P0W8 599 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 TAC3Q9UHF0 121 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 LEF1Q9UJU2 399 aaPredicted RBP6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 ADAMTS6Q9UKP5 1117 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 CLEC4AQ9UMR7 237 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 LRRC42Q9Y546 428 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 LYNX1G3V0Z9 82 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 OR7A17O14581 309 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 TP53I11O14683 189 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 TAPBPO15533 448 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 GMNNO75496 209 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 BCAS2O75934 225 aaPredicted RBP6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 CCNDBP1O95273 360 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 C1orf105O95561 183 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 RPSAP08865 295 aaKnown RBP6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 ALDOCP09972 364 aaKnown RBP6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 LYNX1P0DP58 116 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 RNH1P13489 461 aaKnown RBP6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 BDKRB1P46663 353 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 POLR2JP52435 117 aaKnown RBP6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 SUCLG1P53597 346 aaKnown RBP6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 CTBP2P56545 445 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 NME5P56597 212 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 SKP1P63208 163 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 BNIP2Q12982 314 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 TRAF3Q13114 568 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 ITGADQ13349 1161 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 TRIM25Q14258 630 aaKnown RBP6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 GBX1Q14549 363 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 STK11Q15831 433 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 AP5B1Q2VPB7 878 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 C6orf136Q5SQH8 315 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 NIPAL1Q6NVV3 410 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 ANGPTL8Q6UXH0 198 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 CYHR1Q6ZMK1 362 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 C9orf139Q6ZV77 190 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 BHLHA15Q7RTS1 189 aaPredicted RBP6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 ASPGQ86U10 573 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 UBQLNLQ8IYU4 475 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 BHLHE22Q8NFJ8 381 aaPredicted RBP6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 TOR1AIP2Q8NFQ8 470 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 OR52B6Q8NGF0 335 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 ZNF721Q8TF20 911 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 FBXL8Q96CD0 374 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 MUCL1Q96DR8 90 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 DTNBP1Q96EV8 351 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 CITED4Q96RK1 184 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 TUBB1Q9H4B7 451 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 Q9H521 79 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 ELOVL6Q9H5J4 265 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 SERHLQ9NQF3 203 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 BATF3Q9NR55 127 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 NMRK1Q9NWW6 199 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 TAS2R10Q9NYW0 307 aa6.43□□□□□ -1.38
EXOSC3-206ENST00000489414 ZNF490Q9ULM2 529 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms