RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 IDH3BO43837 385 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 SDC3O75056 442 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 DNAJB6O75190 326 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 UPK1BO75841 260 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 PTTG1O95997 202 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 IFNGP01579 166 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 HLA-DPB1P04440 258 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 IGFBP1P08833 259 aaPredicted RBP7.78□□□□□ -1.16
VTI1A-207ENST00000489357 CT62P0C5K7 136 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 TSPAN19P0C672 248 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 PNMTP11086 282 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 CKMT1AP12532 417 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 PNLIPP16233 465 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 PAICSP22234 425 aaKnown RBP7.78□□□□□ -1.16
VTI1A-207ENST00000489357 ACP1P24666 158 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 PTBP1P26599 531 aaKnown RBP eCLIP7.78□□□□□ -1.16
VTI1A-207ENST00000489357 HTR2AP28223 471 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 SLC6A6P31641 620 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 PTGER1P34995 402 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 SLC1A3P43003 542 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 CRYBB2P43320 205 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 MAZP56270 477 aaKnown RBP7.78□□□□□ -1.16
VTI1A-207ENST00000489357 TAS2R43P59537 309 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 DEFA1P59665 94 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 DEFA3P59666 94 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 ACTC1P68032 377 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 ACTA1P68133 377 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 ITGADQ13349 1161 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 SQSTM1Q13501 440 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 C1orf61Q13536 156 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 EXOSC7Q15024 291 aaKnown RBP7.78□□□□□ -1.16
VTI1A-207ENST00000489357 TRIP6Q15654 476 aaKnown RBP7.78□□□□□ -1.16
VTI1A-207ENST00000489357 MAPK14Q16539 360 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 WDR74Q6RFH5 385 aaPredicted RBP7.78□□□□□ -1.16
VTI1A-207ENST00000489357 SMARCD3Q6STE5 483 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 HSDL2Q6YN16 418 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 PLEKHG7Q6ZR37 379 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 QSOX2Q6ZRP7 698 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 PRSS42Q7Z5A4 293 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 ZNF554Q86TJ5 538 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 GPALPP1Q8IXQ4 340 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 KLHL36Q8N4N3 616 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 EID2Q8N6I1 236 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 IQCF1Q8N6M8 205 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 ZNF485Q8NCK3 441 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 FAM71CQ8NEG0 241 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 SETD6Q8TBK2 473 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 MRPL48Q96GC5 212 aaKnown RBP7.78□□□□□ -1.16
VTI1A-207ENST00000489357 SLC46A1Q96NT5 459 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 MAP3K3Q99759 626 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 CENPOQ9BU64 300 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 DUSP23Q9BVJ7 150 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 ASPNQ9BXN1 380 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 NDEL1Q9GZM8 345 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 NUAK2Q9H093 628 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 OR52D1Q9H346 318 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 C12orf10Q9HB07 376 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 KCNE5Q9UJ90 142 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 SIGLEC7Q9Y286 467 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 PCDHGA1Q9Y5H4 931 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 NINQ8N4C6 2090 aa7.78□□□□□ -1.16
VTI1A-207ENST00000489357 ACACAQ13085 2346 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 ARPC4-TTLL3A0A0A6YYG9 625 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 C2orf92A0A1B0GVN3 265 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 SPAARA0A1B0GVQ0 90 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 TRDV1A0A1B0GX56 115 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 RIIAD1A6NNX1 92 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 TMEM150CB9EJG8 249 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 J3QRE1 110 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 PEX12O00623 359 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 FRS3O43559 492 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 DUX1O43812 170 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 GPX5O75715 221 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 NGFRP08138 427 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 LIMS3P0CW19 117 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 LIMS4P0CW20 117 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 PEPDP12955 493 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 IFI30P13284 250 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 GLB1P16278 677 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 ZNF3P17036 446 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 TBXA2RP21731 343 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 CD1CP29017 333 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 ETV5P41161 510 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 ACAA2P42765 397 aaKnown RBP7.77□□□□□ -1.17
VTI1A-207ENST00000489357 PPICP45877 212 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 GPR4P46093 362 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 ETV1P50549 477 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 PPP1CAP62136 330 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 ID2Q02363 134 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 ALG10BQ5I7T1 473 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 CCNJQ5T5M9 372 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 SLC30A6Q6NXT4 461 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 NIPAL3Q6P499 406 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 MEPCEQ7L2J0 689 aaKnown RBP7.77□□□□□ -1.17
VTI1A-207ENST00000489357 CXXC5Q7LFL8 322 aaKnown RBP7.77□□□□□ -1.17
VTI1A-207ENST00000489357 OLIG3Q7RTU3 272 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 WDR53Q7Z5U6 358 aaPredicted RBP7.77□□□□□ -1.17
VTI1A-207ENST00000489357 CCDC190Q86UF4 302 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 ACBD7Q8N6N7 88 aa7.77□□□□□ -1.17
VTI1A-207ENST00000489357 ZNF615Q8N8J6 731 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms