RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 MAGEA8P43361 318 aa14.06□□□□□ -0.16
USP48-210ENST00000489108 PPOXP50336 477 aa14.06□□□□□ -0.16
USP48-210ENST00000489108 TGFBR3Q03167 851 aa14.06□□□□□ -0.16
USP48-210ENST00000489108 SKP2Q13309 424 aa14.06□□□□□ -0.16
USP48-210ENST00000489108 PDE7AQ13946 482 aa14.06□□□□□ -0.16
USP48-210ENST00000489108 CCNIQ14094 377 aa14.06□□□□□ -0.16
USP48-210ENST00000489108 EFNB3Q15768 340 aa14.06□□□□□ -0.16
USP48-210ENST00000489108 HIKESHIQ53FT3 197 aa14.06□□□□□ -0.16
USP48-210ENST00000489108 PDZK1Q5T2W1 519 aa14.06□□□□□ -0.16
USP48-210ENST00000489108 ZNF418Q8TF45 676 aaPredicted RBP14.06□□□□□ -0.16
USP48-210ENST00000489108 SLC25A43Q8WUT9 341 aaPredicted RBP14.06□□□□□ -0.16
USP48-210ENST00000489108 METTL2AQ96IZ6 378 aaKnown RBP14.06□□□□□ -0.16
USP48-210ENST00000489108 ACTRT3Q9BYD9 372 aa14.06□□□□□ -0.16
USP48-210ENST00000489108 ACER3Q9NUN7 267 aa14.06□□□□□ -0.16
USP48-210ENST00000489108 ZNF180Q9UJW8 692 aa14.06□□□□□ -0.16
USP48-210ENST00000489108 PTGDR2Q9Y5Y4 395 aa14.06□□□□□ -0.16
USP48-210ENST00000489108 SERINC4A6NH21 518 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 CRCPO75575 148 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 PMS2P2O95744 297 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 IFNGR1P15260 489 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 SDC1P18827 310 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 MPGP29372 298 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 OR2B6P58173 313 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 DEFA6Q01524 100 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 RIN1Q13671 783 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 C1QTNF12Q5T7M4 302 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 KLHL24Q6TFL4 600 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 UGT2A3Q6UWM9 527 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 ZNF786Q8N393 782 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 NEU4Q8WWR8 484 aaPredicted RBP14.05□□□□□ -0.16
USP48-210ENST00000489108 TMEM234Q8WY98 164 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 SLC38A2Q96QD8 506 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 KCNS3Q9BQ31 491 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 CDC42EP4Q9H3Q1 356 aaKnown RBP14.05□□□□□ -0.16
USP48-210ENST00000489108 CTPS2Q9NRF8 586 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 PARPBPQ9NWS1 579 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 C1orf109Q9NX04 203 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 KCNE5Q9UJ90 142 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 PCDHB10Q9UN67 800 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 FLVCR1Q9Y5Y0 555 aa14.05□□□□□ -0.16
USP48-210ENST00000489108 B4DSR2 109 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 LYNX1G3V0Z9 82 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 TRIM77I1YAP6 450 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 PDE5AO76074 875 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 CRYAAP02489 173 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 GSTA1P08263 222 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 LYNX1P0DP58 116 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 PRPH2P23942 346 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 CCT3P49368 545 aaKnown RBP14.04□□□□□ -0.16
USP48-210ENST00000489108 H3F3AP84243 136 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 TP53BP2Q13625 1128 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 PRR31Q5SQ13 230 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 THSD4Q6ZMP0 1018 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 GLCCI1Q86VQ1 547 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 LSRQ86X29 649 aaPredicted RBP14.04□□□□□ -0.16
USP48-210ENST00000489108 UBASH3BQ8TF42 649 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 WDR60Q8WVS4 1066 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 FCRL1Q96LA6 429 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 SDF2Q99470 211 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 DOK1Q99704 481 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 CCT7Q99832 543 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 CCDC106Q9BWC9 280 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 OR11A1Q9GZK7 315 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 GPATCH2Q9NW75 528 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 FAF1Q9UNN5 650 aaPredicted RBP14.04□□□□□ -0.16
USP48-210ENST00000489108 HDGFL3Q9Y3E1 203 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 PCDHB14Q9Y5E9 798 aa14.04□□□□□ -0.16
USP48-210ENST00000489108 CENPVL1A0A0U1RR11 272 aa14.03□□□□□ -0.16
USP48-210ENST00000489108 SH3PXD2BA1X283 911 aa14.03□□□□□ -0.16
USP48-210ENST00000489108 SLC28A1O00337 649 aa14.03□□□□□ -0.16
USP48-210ENST00000489108 UBTFL6P0CB48 400 aaPredicted RBP14.03□□□□□ -0.16
USP48-210ENST00000489108 APOBEC1P41238 236 aaKnown RBP14.03□□□□□ -0.16
USP48-210ENST00000489108 GPR68Q15743 365 aa14.03□□□□□ -0.16
USP48-210ENST00000489108 RFTN2Q52LD8 501 aaPredicted RBP14.03□□□□□ -0.16
USP48-210ENST00000489108 ANKRD16Q6P6B7 361 aa14.03□□□□□ -0.16
USP48-210ENST00000489108 TIFABQ6ZNK6 161 aa14.03□□□□□ -0.16
USP48-210ENST00000489108 RELL1Q8IUW5 271 aa14.03□□□□□ -0.16
USP48-210ENST00000489108 SVOPLQ8N434 492 aa14.03□□□□□ -0.16
USP48-210ENST00000489108 OR7D2Q96RA2 312 aa14.03□□□□□ -0.16
USP48-210ENST00000489108 KATNB1Q9BVA0 655 aa14.03□□□□□ -0.16
USP48-210ENST00000489108 RBM4Q9BWF3 364 aaKnown RBP14.03□□□□□ -0.16
USP48-210ENST00000489108 SAP130Q9H0E3 1048 aa14.03□□□□□ -0.16
USP48-210ENST00000489108 HIF1ANQ9NWT6 349 aa14.03□□□□□ -0.16
USP48-210ENST00000489108 CHRNA9Q9UGM1 479 aa14.03□□□□□ -0.16
USP48-210ENST00000489108 SLC9A8Q9Y2E8 581 aa14.03□□□□□ -0.16
USP48-210ENST00000489108 SPIN1Q9Y657 262 aaPredicted RBP14.03□□□□□ -0.16
USP48-210ENST00000489108 hCG_2039718K7EN88 272 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 TMPRSS2O15393 492 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 DNPH1O43598 174 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 CSTAP01040 98 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 ERCC1P07992 297 aaPredicted RBP14.02□□□□□ -0.17
USP48-210ENST00000489108 IGFBP1P08833 259 aaPredicted RBP14.02□□□□□ -0.17
USP48-210ENST00000489108 UROSP10746 265 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 CCNA2P20248 432 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 CALCRP30988 508 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 SLC1A3P43003 542 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 HILS1P60008 231 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 NAAAQ02083 359 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 ZNF141Q15928 474 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 ADRM1Q16186 407 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms