RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 CLCA1A8K7I4 914 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 H0YC42 278 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 EFNA2O43921 213 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 EPPINO95925 133 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 IL2RAP01589 272 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 IFNA8P32881 189 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 MAP2K6P52564 334 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 ZNF136P52737 540 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 SMSP52788 366 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 TPD52P55327 224 aaPredicted RBP14.16□□□□□ -0.14
C9orf3-219ENST00000488186 DLX5P56178 289 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 ACSF3Q4G176 576 aaPredicted RBP14.16□□□□□ -0.14
C9orf3-219ENST00000488186 NSUN5P2Q63ZY6 315 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 ULK3Q6PHR2 472 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 CBLL1Q75N03 491 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 COMTD1Q86VU5 262 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 ADGRG3Q86Y34 549 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 LACC1Q8IV20 430 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 LSMEM1Q8N8F7 131 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 OR6T1Q8NGN1 323 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 RND1Q92730 232 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 OSTF1Q92882 214 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 MCUR1Q96AQ8 359 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 SLC47A1Q96FL8 570 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 TTYH2Q9BSA4 534 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 PRR14Q9BWN1 585 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 RSPO3Q9BXY4 272 aaPredicted RBP14.16□□□□□ -0.14
C9orf3-219ENST00000488186 PCDHAC1Q9H158 963 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 GORASP2Q9H8Y8 452 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 COQ3Q9NZJ6 369 aa14.16□□□□□ -0.14
C9orf3-219ENST00000488186 ERRFI1Q9UJM3 462 aaPredicted RBP14.16□□□□□ -0.14
C9orf3-219ENST00000488186 MCTS1Q9ULC4 181 aaKnown RBP14.16□□□□□ -0.14
C9orf3-219ENST00000488186 SAMD4AQ9UPU9 718 aaKnown RBP14.16□□□□□ -0.14
C9orf3-219ENST00000488186 A0A0J9YW62 118 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 A0A1B0GWA3 101 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 CPSF4LA6NMK7 179 aaKnown RBP14.15□□□□□ -0.14
C9orf3-219ENST00000488186 ADAMDEC1O15204 470 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 ZNF208O43345 1280 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 CXCL13O43927 109 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 FMO6PO60774 539 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 SEMA7AO75326 666 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 DNAJC8O75937 253 aaPredicted RBP14.15□□□□□ -0.14
C9orf3-219ENST00000488186 PDE5AO76074 875 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 PNMTP11086 282 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 OR1E2P47887 323 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 CLK1P49759 484 aaKnown RBP14.15□□□□□ -0.14
C9orf3-219ENST00000488186 CRYBA2P53672 197 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 IFI44LQ53G44 452 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 SYT14P1Q58G82 188 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 ALG10BQ5I7T1 473 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 C6orf89Q6UWU4 347 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 DEF8Q6ZN54 512 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 GGNQ86UU5 652 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 RBM45Q8IUH3 476 aaKnown RBP14.15□□□□□ -0.14
C9orf3-219ENST00000488186 OR10D3Q8NH80 312 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 GEMIN6Q8WXD5 167 aaKnown RBP14.15□□□□□ -0.14
C9orf3-219ENST00000488186 C3orf49Q96BT1 292 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 LRGUKQ96M69 825 aa14.15□□□□□ -0.14
C9orf3-219ENST00000488186 NCOA6Q14686 2063 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-219ENST00000488186 PHF3Q92576 2039 aaKnown RBP14.14□□□□□ -0.15
C9orf3-219ENST00000488186 A0A1W2PNR3 127 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 TMEM72A0PK05 275 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 CD8B2A6NJW9 211 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 SLC22A20A6NK97 555 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 SULT2B1O00204 365 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 ARPC2O15144 300 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 IFNW1P05000 195 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 GLI4P10075 376 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 TNFRSF1BP20333 461 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 HTR2AP28223 471 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 NUP107P57740 925 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 TAS2R41P59536 307 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 CSNK2A1P68400 391 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-219ENST00000488186 PON3Q15166 354 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 ENTPD8Q5MY95 495 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 RTL6Q6ICC9 239 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 ZNF613Q6PF04 617 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 VTCN1Q7Z7D3 282 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 DHFR2Q86XF0 187 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 PHF10Q8WUB8 498 aaKnown RBP14.14□□□□□ -0.15
C9orf3-219ENST00000488186 WNT2BQ93097 391 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 ZHX1-C8orf76Q96EF9 292 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 CCDC120Q96HB5 630 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 HSH2DQ96JZ2 352 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 TM9SF2Q99805 663 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 WFDC6Q9BQY6 131 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 MUC13Q9H3R2 512 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 C12orf10Q9HB07 376 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 DCAF13Q9NV06 445 aaKnown RBP14.14□□□□□ -0.15
C9orf3-219ENST00000488186 HDGFL3Q9Y3E1 203 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 FAM215AQ9Y5M1 114 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 FLNBO75369 2602 aaKnown RBP14.14□□□□□ -0.15
C9orf3-219ENST00000488186 COL12A1Q99715 3063 aa14.14□□□□□ -0.15
C9orf3-219ENST00000488186 ASH1LQ9NR48 2969 aaKnown RBP14.13□□□□□ -0.15
C9orf3-219ENST00000488186 MED12Q93074 2177 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 TRAPPC13A5PLN9 417 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 A8MVM7 634 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 LDLRP01130 860 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 SHC1P29353 583 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 OR2B6P58173 313 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms