RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 IL4I1Q96RQ9 567 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 COPS4Q9BT78 406 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 PRRG3Q9BZD7 231 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 TBL1XR1Q9BZK7 514 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 CCDC90BQ9GZT6 254 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 ANKRD11Q6UB99 2663 aaPredicted RBP12.94□□□□□ -0.34
CUX1-209ENST00000487284 H3BSA7 217 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 WWP2O00308 870 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 KPNA4O00629 521 aaPredicted RBP12.94□□□□□ -0.34
CUX1-209ENST00000487284 EFSO43281 561 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 NDUFB5O43674 189 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 PRKYO43930 277 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 ZNF354AO60765 605 aaPredicted RBP12.94□□□□□ -0.34
CUX1-209ENST00000487284 SEC14L2O76054 403 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 SERPINA7P05543 415 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 ICAM2P13598 275 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 EVI2BP34910 448 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 SLC15A1P46059 708 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 MASP1P48740 699 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 FXYD6P3P58550 94 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 MVKQ03426 396 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 EMX1Q04741 257 aaPredicted RBP12.94□□□□□ -0.34
CUX1-209ENST00000487284 TUBA3CQ13748 450 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 CNPY1Q3B7I2 92 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 MARCH3Q86UD3 253 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 TMCO5AQ8N6Q1 288 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 OR13F1Q8NGS4 319 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 OR4Q3Q8NH05 313 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 RNF138Q8WVD3 245 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 GGHQ92820 318 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 MYDGFQ969H8 173 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 TSSK6Q9BXA6 273 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 TVP23BQ9NYZ1 205 aa12.94□□□□□ -0.34
CUX1-209ENST00000487284 CNOT2Q9NZN8 540 aaKnown RBP12.94□□□□□ -0.34
CUX1-209ENST00000487284 LOC400499M0QZD8 3231 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 MED19A0JLT2 244 aaPredicted RBP12.93□□□□□ -0.34
CUX1-209ENST00000487284 HTR3EA5X5Y0 456 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 ARGFXA6NJG6 315 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 ENO4A6NNW6 628 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 ZNF891A8MT65 544 aaPredicted RBP12.93□□□□□ -0.34
CUX1-209ENST00000487284 EFCAB9A8MZ26 197 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 ENTPD6O75354 484 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 CDK1P06493 297 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 PNMTP11086 282 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 PIPP12273 146 aaPredicted RBP12.93□□□□□ -0.34
CUX1-209ENST00000487284 MST1P26927 711 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 CCR4P51679 360 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 CDC20Q12834 499 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 PGGHGQ32M88 737 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 MEDAGQ5VYS4 303 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 FCRLBQ6BAA4 426 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 LYPD8Q6UX82 237 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 ATG4DQ86TL0 474 aaPredicted RBP12.93□□□□□ -0.34
CUX1-209ENST00000487284 LSRQ86X29 649 aaPredicted RBP12.93□□□□□ -0.34
CUX1-209ENST00000487284 OR13C2Q8NGS9 318 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 TMEM163Q8TC26 289 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 FANK1Q8TC84 345 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 FAR1Q8WVX9 515 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 THAP4Q8WY91 577 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 HGDQ93099 445 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 SAMD8Q96LT4 415 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 FER1L6-AS2Q96M78 137 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 SLC38A2Q96QD8 506 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 SLC19A3Q9BZV2 496 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 LHPPQ9H008 270 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 OR52D1Q9H346 318 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 C12orf10Q9HB07 376 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 ZBTB20Q9HC78 741 aaPredicted RBP12.93□□□□□ -0.34
CUX1-209ENST00000487284 AMBNQ9NP70 447 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 MED17Q9NVC6 651 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 GPR83Q9NYM4 423 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 DNAJC27Q9NZQ0 273 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 MYOTQ9UBF9 498 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 SIGLEC7Q9Y286 467 aa12.93□□□□□ -0.34
CUX1-209ENST00000487284 URB1O60287 2271 aaKnown RBP12.93□□□□□ -0.34
CUX1-209ENST00000487284 EFCAB10A6NFE3 127 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 HCRTR2O43614 444 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 MAN1A2O60476 641 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 HCN1O60741 890 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 OR2J2O76002 312 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 RCBTB2O95199 551 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 IGF2P01344 180 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 FUT1P19526 365 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 EIF2S3P41091 472 aaKnown RBP12.92□□□□□ -0.34
CUX1-209ENST00000487284 CHAF1BQ13112 559 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 SNAPC1Q16533 368 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 CRTC2Q53ET0 693 aaPredicted RBP12.92□□□□□ -0.34
CUX1-209ENST00000487284 SYT14P1Q58G82 188 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 CLEC12AQ5QGZ9 265 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 SLC30A6Q6NXT4 461 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 MISPQ8IVT2 679 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 SPACA3Q8IXA5 215 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 SLC43A2Q8N370 569 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 SIRT6Q8N6T7 355 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 OR2T33Q8NG76 320 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 SLC22A8Q8TCC7 542 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 PSMF1Q92530 271 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 TTC9Q92623 222 aa12.92□□□□□ -0.34
CUX1-209ENST00000487284 SH3YL1Q96HL8 342 aaPredicted RBP12.92□□□□□ -0.34
CUX1-209ENST00000487284 THOC3Q96J01 351 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms