RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 SLC47A1Q96FL8 570 aa10.27□□□□□ -0.77
NUP50-216ENST00000486184 WDYHV1Q96HA8 205 aa10.27□□□□□ -0.77
NUP50-216ENST00000486184 PYURFQ96I23 114 aa10.27□□□□□ -0.77
NUP50-216ENST00000486184 KLHL15Q96M94 604 aa10.27□□□□□ -0.77
NUP50-216ENST00000486184 NPAS1Q99742 590 aa10.27□□□□□ -0.77
NUP50-216ENST00000486184 RSPO3Q9BXY4 272 aaPredicted RBP10.27□□□□□ -0.77
NUP50-216ENST00000486184 POLR2J2Q9GZM3 115 aaKnown RBP10.27□□□□□ -0.77
NUP50-216ENST00000486184 PRDM14Q9GZV8 571 aa10.27□□□□□ -0.77
NUP50-216ENST00000486184 POLR2J3Q9H1A7 115 aaKnown RBP10.27□□□□□ -0.77
NUP50-216ENST00000486184 TIGARQ9NQ88 270 aa10.27□□□□□ -0.77
NUP50-216ENST00000486184 PAQR5Q9NXK6 330 aaPredicted RBP10.27□□□□□ -0.77
NUP50-216ENST00000486184 TINAGQ9UJW2 476 aa10.27□□□□□ -0.77
NUP50-216ENST00000486184 OSGIN1Q9UJX0 560 aa10.27□□□□□ -0.77
NUP50-216ENST00000486184 ZNF835Q9Y2P0 537 aa10.27□□□□□ -0.77
NUP50-216ENST00000486184 FAM32AQ9Y421 112 aaKnown RBP10.27□□□□□ -0.77
NUP50-216ENST00000486184 A0A0B4J2E0 115 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 A0A1B0GUH1 482 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 A0A1B0GX12 115 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 J3QKU1 62 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 ZNF208O43345 1280 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 HOXD4P09016 255 aaPredicted RBP10.26□□□□□ -0.77
NUP50-216ENST00000486184 PLA2G2AP14555 144 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 PSMA4P25789 261 aaKnown RBP10.26□□□□□ -0.77
NUP50-216ENST00000486184 ACVR2AP27037 513 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 EIF1AXP47813 144 aaKnown RBP10.26□□□□□ -0.77
NUP50-216ENST00000486184 DLX5P56178 289 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 CLDN20P56880 219 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 NPTX1Q15818 432 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 EIF2S3LQ2VIR3 472 aaKnown RBP10.26□□□□□ -0.77
NUP50-216ENST00000486184 SYT14P1Q58G82 188 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 C1orf185Q5T7R7 199 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 C1orf146Q5VVC0 180 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 C1QL3Q5VWW1 255 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 HBMQ6B0K9 141 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 PGM2L1Q6PCE3 622 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 P4HA3Q7Z4N8 544 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 YTHDF3Q7Z739 585 aaKnown RBP10.26□□□□□ -0.77
NUP50-216ENST00000486184 ADGRG3Q86Y34 549 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 RBM45Q8IUH3 476 aaKnown RBP10.26□□□□□ -0.77
NUP50-216ENST00000486184 CHERPQ8IWX8 916 aaKnown RBP10.26□□□□□ -0.77
NUP50-216ENST00000486184 OR4D11Q8NGI4 311 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 ADAMTS16Q8TE57 1224 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 RELTQ969Z4 430 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 OR5B2Q96R09 309 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 TRIB1Q96RU8 372 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 SEPHS2Q99611 448 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 PRR14Q9BWN1 585 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 PRRG4Q9BZD6 226 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 ADAM19Q9H013 955 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 C12orf10Q9HB07 376 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 SLC7A8Q9UHI5 535 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 MCTS1Q9ULC4 181 aaKnown RBP10.26□□□□□ -0.77
NUP50-216ENST00000486184 SLC7A7Q9UM01 511 aa10.26□□□□□ -0.77
NUP50-216ENST00000486184 BSNQ9UPA5 3926 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 RP1L1Q8IWN7 2480 aaPredicted RBP10.25□□□□□ -0.77
NUP50-216ENST00000486184 ZNF462Q96JM2 2506 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 TMEM72A0PK05 275 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 AQP12BA6NM10 295 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 A8MVM7 634 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 hCG_2039718K7EN88 272 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 CCL21O00585 134 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 TNFSF11O14788 317 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 CHP2O43745 196 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 OR5F1O95221 314 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 SYNGR4O95473 234 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 FABP3P05413 133 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 STSP08842 583 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 GTF2E2P29084 291 aaKnown RBP10.25□□□□□ -0.77
NUP50-216ENST00000486184 CA7P43166 264 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 CLK1P49759 484 aaKnown RBP10.25□□□□□ -0.77
NUP50-216ENST00000486184 CDH12P55289 794 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 PER3P56645 1201 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 CLDN15P56746 228 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 CARD18P57730 90 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 CSNK2A1P68400 391 aaPredicted RBP10.25□□□□□ -0.77
NUP50-216ENST00000486184 MS4A2Q01362 244 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 CHRNB3Q05901 458 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 ST3GAL3Q11203 375 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 ZSCAN26Q16670 478 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 FAM98BQ52LJ0 330 aaKnown RBP10.25□□□□□ -0.77
NUP50-216ENST00000486184 TMEM211Q6ICI0 200 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 MTFR2Q6P444 385 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 C5orf46Q6UWT4 87 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 B3GNT6Q6ZMB0 384 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 C3P1Q6ZMU1 363 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 ASRGL1Q7L266 308 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 ATG4DQ86TL0 474 aaPredicted RBP10.25□□□□□ -0.77
NUP50-216ENST00000486184 GGNQ86UU5 652 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 SPATA24Q86W54 205 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 DOLPP1Q86YN1 238 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 AQP12AQ8IXF9 295 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 ANKK1Q8NFD2 765 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 OR10D3Q8NH80 312 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 OR2V1Q8NHB1 315 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 ZPLD1Q8TCW7 415 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 ZNF524Q96C55 264 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 ZHX1-C8orf76Q96EF9 292 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 SLC41A3Q96GZ6 507 aa10.25□□□□□ -0.77
NUP50-216ENST00000486184 RSRC1Q96IZ7 334 aaKnown RBP10.25□□□□□ -0.77
NUP50-216ENST00000486184 PRRC1Q96M27 445 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms