RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ADAM11O75078 769 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 SERPINB7O75635 380 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 KRT34O76011 436 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 CGAP01215 116 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 FESP07332 822 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 YES1P07947 543 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 GPX2P18283 190 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 AQP1P29972 269 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 AGTR1P30556 359 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 MTPNP58546 118 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 NCALDP61601 193 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 KLF10Q13118 480 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 CAPRIN1Q14444 709 aaKnown RBP11.17□□□□□ -0.62
PTCD1-205ENST00000485746 CGB2Q6NT52 195 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 BEND4Q6ZU67 534 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 RETREG3Q86VR2 466 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 C11orf65Q8NCR3 313 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 HIPK4Q8NE63 616 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 RNF217Q8TC41 542 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 RNF128Q8TEB7 428 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 ZNF775Q96BV0 537 aaPredicted RBP11.17□□□□□ -0.62
PTCD1-205ENST00000485746 ANKRD27Q96NW4 1050 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 DACH2Q96NX9 599 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 SH3GL1Q99961 368 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 NAA11Q9BSU3 229 aaPredicted RBP11.17□□□□□ -0.62
PTCD1-205ENST00000485746 MED18Q9BUE0 208 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 OR11A1Q9GZK7 315 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 TMEM38AQ9H6F2 299 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 GID8Q9NWU2 228 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 KLHL28Q9NXS3 571 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 SELENONQ9NZV5 590 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 OSGIN1Q9UJX0 560 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 PRDM4Q9UKN5 801 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 ITGB1BP2Q9UKP3 347 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 CAPN7Q9Y6W3 813 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 MED12Q93074 2177 aa11.17□□□□□ -0.62
PTCD1-205ENST00000485746 ARHGAP21Q5T5U3 1957 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 KIAA1549Q9HCM3 1950 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 TRBV5-3A0A0A0MS03 114 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 A6NNC1 897 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 MRASO14807 208 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 PMS2P2O95744 297 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 PRG2P13727 222 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 UGT2B10P36537 528 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 ACAA2P42765 397 aaKnown RBP11.16□□□□□ -0.62
PTCD1-205ENST00000485746 KRTAP10-9P60411 292 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 PLAURQ03405 335 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 RBBP4Q09028 425 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 GUSBP1Q15486 140 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 TRMT5Q32P41 509 aaKnown RBP11.16□□□□□ -0.62
PTCD1-205ENST00000485746 ANKRD34AQ69YU3 496 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 NUFIP2Q7Z417 695 aaKnown RBP11.16□□□□□ -0.62
PTCD1-205ENST00000485746 SERPINA11Q86U17 422 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 MTDHQ86UE4 582 aaKnown RBP11.16□□□□□ -0.62
PTCD1-205ENST00000485746 SNX32Q86XE0 403 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 ARMC8Q8IUR7 673 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 ZNF100Q8IYN0 542 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 PCYOX1LQ8NBM8 494 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 BHLHE22Q8NFJ8 381 aaPredicted RBP11.16□□□□□ -0.62
PTCD1-205ENST00000485746 SLC26A7Q8TE54 656 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 ARL5BQ96KC2 179 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 ECSITQ9BQ95 431 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 TAPBPLQ9BX59 468 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 FAM107BQ9H098 131 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 NSRP1Q9H0G5 558 aaKnown RBP11.16□□□□□ -0.62
PTCD1-205ENST00000485746 IKZF5Q9H5V7 419 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 PIF1Q9H611 641 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 GP6Q9HCN6 339 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 SAR1AQ9NR31 198 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 ZNF226Q9NYT6 803 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 EMC3Q9P0I2 261 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 TMEM181Q9P2C4 612 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 KLHL13Q9P2N7 655 aa11.16□□□□□ -0.62
PTCD1-205ENST00000485746 BBIP1A8MTZ0 92 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 ZNF208O43345 1280 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 FRS3O43559 492 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 CYTIPO60759 359 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 CCDC22O60826 627 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 CTAG2O75638 210 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 ADSLP30566 484 aaPredicted RBP11.15□□□□□ -0.62
PTCD1-205ENST00000485746 PRKAR1BP31321 381 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 IDUAP35475 653 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 MAP2K6P52564 334 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 SLC35A1P78382 337 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 HOXC5Q00444 222 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 SELPLGQ14242 412 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 DAZAP2Q15038 168 aaPredicted RBP11.15□□□□□ -0.62
PTCD1-205ENST00000485746 REP15Q6BDI9 236 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 ALKBH2Q6NS38 261 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 DHRS4L2Q6PKH6 230 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 GALNT5Q7Z7M9 940 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 CDH24Q86UP0 819 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 SLC30A8Q8IWU4 369 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 C10orf111Q8N326 155 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 OR10A6Q8NH74 314 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 PIGXQ8TBF5 258 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 C10orf82Q8WW14 230 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 ZC3HAV1LQ96H79 300 aaKnown RBP11.15□□□□□ -0.62
PTCD1-205ENST00000485746 WFIKKN1Q96NZ8 548 aa11.15□□□□□ -0.62
PTCD1-205ENST00000485746 ELAC2Q9BQ52 826 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms