RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 TMEM234Q8WY98 164 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 OR5B2Q96R09 309 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 KCNK17Q96T54 332 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 SIKE1Q9BRV8 207 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 BEX2Q9BXY8 128 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 SERINC1Q9NRX5 453 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 MRGBPQ9NV56 204 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 ATAD3AQ9NVI7 634 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 MALT1Q9UDY8 824 aa11.46□□□□□ -0.57
HDAC6-227ENST00000485102 SERINC4A6NH21 518 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 TRPC5OSA6NMA1 111 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 ZNF716A6NP11 495 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 C9JVG2 144 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 GPR171O14626 319 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 AK1P00568 194 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 BMP4P12644 408 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 EFNA1P20827 205 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-227ENST00000485102 CLK1P49759 484 aaKnown RBP11.45□□□□□ -0.58
HDAC6-227ENST00000485102 RPL14P50914 215 aaKnown RBP11.45□□□□□ -0.58
HDAC6-227ENST00000485102 CASP9P55211 416 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 SESN3P58005 492 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 MAD2L1Q13257 205 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-227ENST00000485102 SKP2Q13309 424 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 NDUFAF6Q330K2 333 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 SYT14P1Q58G82 188 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 BHLHB9Q6PI77 547 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 SLC22A25Q6T423 547 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 DEPDC4Q8N2C3 294 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 PIAS4Q8N2W9 510 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-227ENST00000485102 OR7A2PQ8NGA2 310 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 MGARPQ8TDB4 240 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 C10orf105Q8TEF2 133 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 FAM168AQ92567 244 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 ZNF775Q96BV0 537 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-227ENST00000485102 CHMP6Q96FZ7 201 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 PPP3R2Q96LZ3 170 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 MAGEB18Q96M61 343 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 INPP5KQ9BT40 448 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 AMBRA1Q9C0C7 1298 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 ACER3Q9NUN7 267 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 TAS2R16Q9NYV7 291 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 HAO1Q9UJM8 370 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 TRAF6Q9Y4K3 522 aa11.45□□□□□ -0.58
HDAC6-227ENST00000485102 WDR91A4D1P6 747 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 PDLIM1O00151 329 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 SULT2B1O00204 365 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 PMS2P2O95744 297 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 PGCP20142 388 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 NTF4P34130 210 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 APOBEC1P41238 236 aaKnown RBP11.44□□□□□ -0.58
HDAC6-227ENST00000485102 EFNA4P52798 201 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 WDR4P57081 412 aaKnown RBP11.44□□□□□ -0.58
HDAC6-227ENST00000485102 TP53BP2Q13625 1128 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 GABRA6Q16445 453 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 SMU1Q2TAY7 513 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 KRTAP24-1Q3LI83 254 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 GALNTL6Q49A17 601 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 XKR7Q5GH72 579 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 PDZK1Q5T2W1 519 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 RIMKLAQ8IXN7 391 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 TWIST2Q8WVJ9 160 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 APH1AQ96BI3 265 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 BOD1Q96IK1 185 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 OR7D2Q96RA2 312 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 PRPF18Q99633 342 aaKnown RBP11.44□□□□□ -0.58
HDAC6-227ENST00000485102 THUMPD3Q9BV44 507 aaKnown RBP11.44□□□□□ -0.58
HDAC6-227ENST00000485102 MECRQ9BV79 373 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 BHLHE41Q9C0J9 482 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-227ENST00000485102 ASB6Q9NWX5 421 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 KCNE5Q9UJ90 142 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 NOSIPQ9Y314 301 aaKnown RBP11.44□□□□□ -0.58
HDAC6-227ENST00000485102 HDGFL3Q9Y3E1 203 aa11.44□□□□□ -0.58
HDAC6-227ENST00000485102 SPIN1Q9Y657 262 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-227ENST00000485102 CIB4A0PJX0 185 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 ANKRD28O15084 1053 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 LMX1BO60663 402 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 STX11O75558 287 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 RAD51DO75771 328 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 UGT2B17O75795 530 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 TGDSO95455 350 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 C6orf47O95873 294 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 IGHV4-31P0DP07 118 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 PRPS1L1P21108 318 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 PTNP21246 168 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 BGNP21810 368 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 USF1P22415 310 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-227ENST00000485102 APOBEC3AP31941 199 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-227ENST00000485102 FABP6P51161 128 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 H3F3AP84243 136 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 CHRNB3Q05901 458 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 MPP2Q14168 576 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 ARHGAP11BQ3KRB8 267 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 B3GLCTQ6Y288 498 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 EIF3MQ7L2H7 374 aaKnown RBP11.43□□□□□ -0.58
HDAC6-227ENST00000485102 C17orf78Q8N4C9 275 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 ZNF525Q8N782 197 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 ZNF614Q8N883 585 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 FAM71CQ8NEG0 241 aa11.43□□□□□ -0.58
HDAC6-227ENST00000485102 C1orf162Q8NEQ5 155 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-227ENST00000485102 OR52N5Q8NH56 324 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms