RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 SLC35A5Q9BS91 424 aa15.9■□□□□ 0.14
ATG4B-221ENST00000483778 SERINC1Q9NRX5 453 aa15.9■□□□□ 0.14
ATG4B-221ENST00000483778 HAO1Q9UJM8 370 aa15.9■□□□□ 0.14
ATG4B-221ENST00000483778 IGKV3D-15A0A087WSY6 115 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 A0A1W2PR80 420 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 PGM3O95394 542 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 IGHV4-39P01824 125 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 GSNP06396 782 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 CHRM4P08173 479 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 LBPP18428 481 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 COX5AP20674 150 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 IDH2P48735 452 aaKnown RBP15.89■□□□□ 0.13
ATG4B-221ENST00000483778 KCNJ10P78508 379 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 STX3Q13277 289 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 PPA1Q15181 289 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 GPAT3Q53EU6 434 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 COX20Q5RI15 118 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 ATAD3BQ5T9A4 648 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 ANXA8L1Q5VT79 327 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 GALNT5Q7Z7M9 940 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 RNF130Q86XS8 419 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 POTEKPQ9BYX7 375 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 SLC38A1Q9H2H9 487 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 MEAF6Q9HAF1 191 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 NGBQ9NPG2 151 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 SLC6A13Q9NSD5 602 aa15.89■□□□□ 0.13
ATG4B-221ENST00000483778 MARCOQ9UEW3 520 aaPredicted RBP15.89■□□□□ 0.13
ATG4B-221ENST00000483778 COL6A5A8TX70 2615 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 ARFGEF3Q5TH69 2177 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 CCDC154A6NI56 674 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 SDHDO14521 159 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 GUSBP08236 651 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 S100A3P33764 101 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 CHI3L1P36222 383 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-221ENST00000483778 APOBEC1P41238 236 aaKnown RBP15.88■□□□□ 0.13
ATG4B-221ENST00000483778 BST1Q10588 318 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 MAPK11Q15759 364 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 DNAJC14Q6Y2X3 702 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-221ENST00000483778 ZNF563Q8TA94 476 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 CCDC115Q96NT0 180 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 TRAF4Q9BUZ4 470 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-221ENST00000483778 SLCO5A1Q9H2Y9 848 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 CENPHQ9H3R5 247 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 WDR55Q9H6Y2 383 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-221ENST00000483778 SSU72Q9NP77 194 aaKnown RBP15.88■□□□□ 0.13
ATG4B-221ENST00000483778 KCNK9Q9NPC2 374 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 POLE3Q9NRF9 147 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 CISD1Q9NZ45 108 aaKnown RBP15.88■□□□□ 0.13
ATG4B-221ENST00000483778 CHRNA9Q9UGM1 479 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 SLC35A3Q9Y2D2 325 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 ATRQ13535 2644 aa15.88■□□□□ 0.13
ATG4B-221ENST00000483778 ANK3Q12955 4377 aaKnown RBP15.87■□□□□ 0.13
ATG4B-221ENST00000483778 A0A1W2PP18 115 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 ZC3H12DA2A288 527 aaKnown RBP15.87■□□□□ 0.13
ATG4B-221ENST00000483778 OR5H1A6NKK0 313 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 TMCC2O75069 709 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 RAD51DO75771 328 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 IMPDH2P12268 514 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 GGT1P19440 569 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 KHKP50053 298 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 WDR4P57081 412 aaKnown RBP15.87■□□□□ 0.13
ATG4B-221ENST00000483778 OR2B6P58173 313 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 CSNK2A1P68400 391 aaPredicted RBP15.87■□□□□ 0.13
ATG4B-221ENST00000483778 SPOCK1Q08629 439 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 VEZF1Q14119 521 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 TIMM23BQ5SRD1 257 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 FBXW9Q5XUX1 488 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 UBE2J2Q8N2K1 259 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 ARFGAP2Q8N6H7 521 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 OR52N5Q8NH56 324 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 PNPT1Q8TCS8 783 aaKnown RBP15.87■□□□□ 0.13
ATG4B-221ENST00000483778 GTPBP3Q969Y2 492 aaKnown RBP15.87■□□□□ 0.13
ATG4B-221ENST00000483778 ARL8AQ96BM9 186 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 C1QTNF6Q9BXI9 259 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 REG4Q9BYZ8 158 aa15.87■□□□□ 0.13
ATG4B-221ENST00000483778 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.87■□□□□ 0.13
ATG4B-221ENST00000483778 NOSIPQ9Y314 301 aaKnown RBP15.87■□□□□ 0.13
ATG4B-221ENST00000483778 TMED7-TICAM2A0A0A6YYA0 188 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 GOLGA8QA0A0J9YX86 632 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 TMEM72A0PK05 275 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 GOLGA8OA6NCC3 632 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 E7EQL1 145 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 E9PBE3 544 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 GOLGA8NF8WBI6 632 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 ABCD4O14678 606 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 TM9SF1O15321 606 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 PMS2P2O95744 297 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 AGR2O95994 175 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 ZNF83P51522 516 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 H3F3AP84243 136 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 PDK3Q15120 406 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 CEP85LQ5SZL2 805 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 DNM1P46Q6ZS02 220 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 GRINAQ7Z429 371 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 VPS37AQ8NEZ2 397 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 OR52E4Q8NGH9 312 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 SLC25A43Q8WUT9 341 aaPredicted RBP15.86■□□□□ 0.13
ATG4B-221ENST00000483778 MUCL1Q96DR8 90 aa15.86■□□□□ 0.13
ATG4B-221ENST00000483778 TRMT61AQ96FX7 289 aaKnown RBP15.86■□□□□ 0.13
ATG4B-221ENST00000483778 PAIP2Q9BPZ3 127 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms