RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 MED20Q9H944 212 aa5.93□□□□□ -1.46
CLK1-212ENST00000482590 HHATLQ9HCP6 504 aa5.93□□□□□ -1.46
CLK1-212ENST00000482590 ASF1BQ9NVP2 202 aa5.93□□□□□ -1.46
CLK1-212ENST00000482590 NDUFA13Q9P0J0 144 aa5.93□□□□□ -1.46
CLK1-212ENST00000482590 DHCR7Q9UBM7 475 aaKnown RBP5.93□□□□□ -1.46
CLK1-212ENST00000482590 LRBAP50851 2863 aa5.93□□□□□ -1.46
CLK1-212ENST00000482590 CELSR2Q9HCU4 2923 aa5.93□□□□□ -1.46
CLK1-212ENST00000482590 CACNA1CQ13936 2221 aa5.93□□□□□ -1.46
CLK1-212ENST00000482590 POLEQ07864 2286 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 MYO7BQ6PIF6 2116 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 IGLV3-16A0A075B6K0 115 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 TRAV6A0A075B6T7 132 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 TRBV5-4A0A0C4DH59 114 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 FEZF1A0PJY2 475 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 MAGEB16A2A368 324 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 ANKUB1A6NFN9 424 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 PRR23D1E9PI22 279 aaPredicted RBP5.92□□□□□ -1.46
CLK1-212ENST00000482590 AKR7A2O43488 359 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 NIPSNAP2O75323 286 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 KRT36O76013 467 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 GAS8O95995 478 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 RPN2P04844 631 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 UQCRHP07919 91 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 CHRM5P08912 532 aaPredicted RBP5.92□□□□□ -1.46
CLK1-212ENST00000482590 OR56A5P0C7T3 313 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 RNF224P0DH78 156 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 PRR23D2P0DMB1 279 aaPredicted RBP5.92□□□□□ -1.46
CLK1-212ENST00000482590 PPP3CBP16298 524 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 CD22P20273 847 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 MSNP26038 577 aaKnown RBP5.92□□□□□ -1.46
CLK1-212ENST00000482590 CHI3L1P36222 383 aaPredicted RBP5.92□□□□□ -1.46
CLK1-212ENST00000482590 RWDD2BP57060 319 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 SSTP61278 116 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 DLK1P80370 383 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 PPP2R2BQ00005 443 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 PLOD1Q02809 727 aaPredicted RBP5.92□□□□□ -1.46
CLK1-212ENST00000482590 POU6F1Q14863 301 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 PNLIPRP3Q17RR3 467 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 SLC5A12Q1EHB4 618 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 PDLIM3Q53GG5 364 aaPredicted RBP5.92□□□□□ -1.46
CLK1-212ENST00000482590 SPANXN2Q5MJ10 180 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 C6orf10Q5SRN2 563 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 ZNF626Q68DY1 528 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 PRR27Q6MZM9 219 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 ZNF782Q6ZMW2 699 aaPredicted RBP5.92□□□□□ -1.46
CLK1-212ENST00000482590 MTERF4Q7Z6M4 381 aaKnown RBP5.92□□□□□ -1.46
CLK1-212ENST00000482590 SLC7A5P1Q8MH63 180 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 SYCE1Q8N0S2 351 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 C1orf87Q8N0U7 546 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 CADM3Q8N126 398 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 CLDN19Q8N6F1 224 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 ZNF611Q8N823 705 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 TTC29Q8NA56 475 aaPredicted RBP5.92□□□□□ -1.46
CLK1-212ENST00000482590 OR9K2Q8NGE7 335 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 OR2Y1Q8NGV0 311 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 OR5K2Q8NHB8 316 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 CLHC1Q8NHS4 586 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 WDR20Q8TBZ3 569 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 AKAP1Q92667 903 aaKnown RBP eCLIP5.92□□□□□ -1.46
CLK1-212ENST00000482590 ZBTB9Q96C00 473 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 GPR78Q96P69 363 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 FRG2BQ96QU4 278 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 DDOQ99489 341 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 NRTNQ99748 197 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 WDR77Q9BQA1 342 aaPredicted RBP5.92□□□□□ -1.46
CLK1-212ENST00000482590 TSSK1BQ9BXA7 367 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 AMBRA1Q9C0C7 1298 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 NEK6Q9HC98 313 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 FAM60AQ9NP50 221 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 YAE1D1Q9NRH1 226 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 AGPAT4Q9NRZ5 378 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 NUDT15Q9NV35 164 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 NLE1Q9NVX2 485 aaPredicted RBP5.92□□□□□ -1.46
CLK1-212ENST00000482590 SMARCAL1Q9NZC9 954 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 ERRFI1Q9UJM3 462 aaPredicted RBP5.92□□□□□ -1.46
CLK1-212ENST00000482590 PLCL2Q9UPR0 1127 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 SLC9A8Q9Y2E8 581 aa5.92□□□□□ -1.46
CLK1-212ENST00000482590 SCN3AQ9NY46 2000 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 A0A1B0GX78 115 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 A0A1W2PPW3 197 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 BTBD17A6NE02 478 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 A8MUI8 341 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 TARM1B6A8C7 271 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 MAP2K7O14733 419 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 PSMD3O43242 534 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 ZNF208O43345 1280 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 KRT86O43790 486 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 TMPRSS11DO60235 418 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 PRAMEF2O60811 474 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 ATP6V1G1O75348 118 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 KLF7O75840 302 aaPredicted RBP5.91□□□□□ -1.46
CLK1-212ENST00000482590 AP2A1O95782 977 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 LDLRP01130 860 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 PRSS56P0CW18 603 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 PRKACAP17612 351 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 MAGP20916 626 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 CDX1P47902 265 aaPredicted RBP5.91□□□□□ -1.46
CLK1-212ENST00000482590 CSNK2BP67870 215 aa5.91□□□□□ -1.46
CLK1-212ENST00000482590 CBX1P83916 185 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms