RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 HDGFL3Q9Y3E1 203 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 FREM1Q5H8C1 2179 aa11.91□□□□□ -0.5
CTDSP1-208ENST00000482272 TRIM64A6NGJ6 449 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 TRIM64BA6NI03 449 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 CLDN24A6NM45 220 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 SLCO1B7G3V0H7 640 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 HMGN4O00479 90 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 GPR171O14626 319 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 DNPH1O43598 174 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 LYZL6O75951 148 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 PMS2P2O95744 297 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 PGRP06401 933 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 GGT1P19440 569 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 CDKN2CP42773 168 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 IDH2P48735 452 aaKnown RBP11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 PPA1Q15181 289 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 STK11Q15831 433 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 SYPL1Q16563 259 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 TIMM23BQ5SRD1 257 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 FBXW9Q5XUX1 488 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 ATG16L1Q676U5 607 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 ATG4DQ86TL0 474 aaPredicted RBP11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 ADGRG3Q86Y34 549 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 UBE2J2Q8N2K1 259 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 GLB1L3Q8NCI6 653 aaPredicted RBP11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 LILRB1Q8NHL6 650 aaPredicted RBP11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 SMAP2Q8WU79 429 aaPredicted RBP11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 ZNF75CPQ92670 426 aaPredicted RBP11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 INPP5KQ9BT40 448 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 SLC6A13Q9NSD5 602 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 TRAPPC4Q9Y296 219 aa11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 NOSIPQ9Y314 301 aaKnown RBP11.9□□□□□ -0.5
CTDSP1-208ENST00000482272 IGKV3D-15A0A087WSY6 115 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 A0A1W2PP18 115 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 DPRXA6NFQ7 191 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 AGAP5A6NIR3 686 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 HDAC3O15379 428 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 KRT75O95678 551 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 IL6P05231 212 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 NR2F1P10589 423 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 UQCRBP14927 111 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 IL7RP16871 459 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 IGHV1-2P23083 117 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 MAGEA8P43361 318 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 MAP2K6P52564 334 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 BSPH1Q075Z2 132 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 SEZ6L2Q6UXD5 910 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 DNAJC14Q6Y2X3 702 aaPredicted RBP11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 LRRC74BQ6ZQY2 392 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 MAVSQ7Z434 540 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 ANKFN1Q8N957 763 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 PIGXQ8TBF5 258 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 CNOT9Q92600 299 aaKnown RBP11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 GTPBP3Q969Y2 492 aaKnown RBP11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 APH1AQ96BI3 265 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 DDIT4LQ96D03 193 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 DNAJA3Q96EY1 480 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 ARL5BQ96KC2 179 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 WDR55Q9H6Y2 383 aaPredicted RBP11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 TMEM181Q9P2C4 612 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 GPR45Q9Y5Y3 372 aa11.89□□□□□ -0.51
CTDSP1-208ENST00000482272 TMED7-TICAM2A0A0A6YYA0 188 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 GOLGA8QA0A0J9YX86 632 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 CIB4A0PJX0 185 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 GOLGA8OA6NCC3 632 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 ZNF716A6NP11 495 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 GOLGA8NF8WBI6 632 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 ZNF208O43345 1280 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 EIF1BO60739 113 aaKnown RBP11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 SNNO75324 88 aaPredicted RBP11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 MRPL33O75394 65 aaKnown RBP11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 PGM3O95394 542 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 GSNP06396 782 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 DBIP07108 87 aaKnown RBP11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 DANCRP0C864 163 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 KITP10721 976 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 CCNA2P20248 432 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 EPHA3P29320 983 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 IDUAP35475 653 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 OR2B6P58173 313 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 SLC35A1P78382 337 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 MAPK11Q15759 364 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 ETFDHQ16134 617 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 ZNF672Q499Z4 452 aaPredicted RBP11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 NXNQ6DKJ4 435 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 ABLIM2Q6H8Q1 611 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 WDR60Q8WVS4 1066 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 RADILQ96JH8 1075 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 NAA11Q9BSU3 229 aaPredicted RBP11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 SLC38A1Q9H2H9 487 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 FAIMQ9NVQ4 179 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 PARPBPQ9NWS1 579 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 CISD1Q9NZ45 108 aaKnown RBP11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 PRDM4Q9UKN5 801 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 TMED7Q9Y3B3 224 aa11.88□□□□□ -0.51
CTDSP1-208ENST00000482272 TMEM120BA0PK00 339 aa11.87□□□□□ -0.51
CTDSP1-208ENST00000482272 CFAP73A6NFT4 308 aa11.87□□□□□ -0.51
CTDSP1-208ENST00000482272 CCT8L1PA6NM43 557 aa11.87□□□□□ -0.51
CTDSP1-208ENST00000482272 OVOL3O00110 214 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms